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AT4G38730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.938
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF803)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT2G21120.1); Has 1281 Blast hits to 1255 proteins in 234 species: Archae - 0; Bacteria - 123; Metazoa - 451; Fungi - 355; Plants - 247; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNR8eggNOG:KOG2922EMBL:AK117425EMBL:AL035656
EMBL:AL161593EMBL:BT005138EMBL:CP002687EnsemblPlants:AT4G38730
EnsemblPlants:AT4G38730.1entrez:830028GeneID:830028GO:GO:0005769
GO:GO:0005886GO:GO:0015095GO:GO:0015693GO:GO:0016021
Gramene:AT4G38730.1hmmpanther:PTHR12570hmmpanther:PTHR12570:SF11HOGENOM:HOG000203962
InParanoid:Q8GYS1InterPro:IPR008521KEGG:ath:AT4G38730OMA:MTFGEIA
PANTHER:PTHR12570PaxDb:Q8GYS1Pfam:PF05653Pfam:Q8GYS1
PhylomeDB:Q8GYS1PIR:T06072PRIDE:Q8GYS1PRO:PR:Q8GYS1
ProteinModelPortal:Q8GYS1Proteomes:UP000006548RefSeq:NP_195584.2SUPFAM:0043518
TAIR:AT4G38730TMHMM:TMhelixUniGene:At.31155UniProt:Q8GYS1
Coordinates (TAIR10) chr4:-:18080484..18082305
Molecular Weight (calculated) 35906.40 Da
IEP (calculated) 5.32
GRAVY (calculated) 0.64
Length 326 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSDNEMGLV LAVSSSVFIG SSFILKKKGL KRAAANGTRA GFGGYTYLLE PLWWVGLVTM TFGEIANFVA YVYAPAVLVT PLGALSIIIS AVLAHFLLDE
101: KLRKMGVWGC VCCIVGSVMI VIHAPQEQTP NSVEEIWKLA MQPAFLIYVA ISMSIVLALI LYCEPLCGQT NILVYIGICS LMGSLTVMSI KAVGIAIKLT
201: FEGINQIWYP ETWFFAMVAA ICVVMQMIYL NKALDTFNAA IVSPIYYVMF TTLTIVASAI MFKDWNGQNT DSIASEICGF ITVLTGTVIL HSTREEEQAS
301: PRRMRWQDSG KSFDEEHLTS LYSPEY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)