suba logo
AT3G43220.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoinositide phosphatase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2131 Blast hits to 1660 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 800; Fungi - 658; Plants - 325; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G43220-MONOMERBioCyc:ARA:GQT-1307-MONOMEREC:3.1.3.-eggNOG:COG5329
eggNOG:KOG1888EMBL:AL353871EMBL:AY094477EMBL:AY227246
EMBL:CP002686EnsemblPlants:AT3G43220EnsemblPlants:AT3G43220.1entrez:823397
ExpressionAtlas:Q7XZU2GeneID:823397Genevisible:Q7XZU2GO:GO:0005774
GO:GO:0007033GO:GO:0036092GO:GO:0042578hmmpanther:PTHR11200
hmmpanther:PTHR11200:SF122HOGENOM:HOG000168063InParanoid:Q7XZU2InterPro:IPR002013
InterPro:IPR030213iPTMnet:Q7XZU2KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-
KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-OMA:ENPCENAPANTHER:PTHR11200:SF122PaxDb:Q7XZU2
Pfam:PF02383Pfam:Q7XZU2Pfscan:PS50275PhylomeDB:Q7XZU2
PIR:T49236PRIDE:Q7XZU2PRO:PR:Q7XZU2PROSITE:PS50275
ProteinModelPortal:Q7XZU2Proteomes:UP000006548Reactome:R-ATH-1660514Reactome:R-ATH-1660516
Reactome:R-ATH-1660517RefSeq:NP_189908.2SMR:Q7XZU2STRING:3702.AT3G43220.1
TAIR:AT3G43220TMHMM:TMhelixUniGene:At.1723UniProt:Q7XZU2
Coordinates (TAIR10) chr3:-:15197123..15202653
Molecular Weight (calculated) 92752.20 Da
IEP (calculated) 6.57
GRAVY (calculated) -0.51
Length 818 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSTDDAGT TTHSLQEFKL FETQSNFYMI GWDGSGVYRV LKIDRLDPSE LNISQDSTHY TKKECYELLK RIHEGNKATG GLKLVTLCYG IIGFVKFLGP
101: YYMLLITERR HIGDLFGHSV YAVSKSEIVA LHNSTVQCNF ANSRDENRYK RLLCMVDLTK DFFFSYSYNV MRSYQKNVCN YETGHNLYEK MFVWNEFLTR
201: GIRHHLRNTL WTVALVYGFF KQASLSESGK DFKITLIARR SRHNAGTRYL KRGVNRNGDV ANDVETEQIV SEDVPEDHPM QISSVVQNRG SIPLFWSQET
301: SRLNLKPDIV LSKKEPNYEA TRLHFDNLVE RYGNPIIILN LIKTKERRPR ESILREEFVN AIDFINKDLP EENRLRFLHW DLHKHFRSKT KNVLALLCKV
401: ATCALMLTDL FYYQVTPAMT IEDSMSLSSS SDADTGDISP HTSSDDDNGD HDSLEKKSSR SKNIAYGKCD VKPPRLQSGV LRTNCIDCLD RTNVAQYAYG
501: WAALGQQLHV LGIRDVPAIE LDDPLAISLM GLYERMGDTL AHQYGGSAAH NKVFSERRGQ WRAATQSQEF LRTLQRYYNN AYMDADKQDA INIFLGTFQP
601: EQGMPAIWEL RSNSLSNGRN GEMNIGKDER FLVKRCLSDG DFLHESCTPL SAMSSNHESM PQKGFSAPLQ HVSHILSESS SDIPVSNDVA LSRCTPSMPR
701: KQLFGDVQKV HRFGSDQVYF GGEEDMSSVS NFVDIEWLSS ENPCENALFD RSSELTRNLT AETSSTENSV NGVGQSAPTI SESGSSSSKG KEPMGTKIRE
801: DFPDSFKEWV AYGEALCH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)