AT3G28430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:10657441..10662404 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94746.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.76 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||
| Length | 837 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWLSFLRPRD RFSLAELRYL TDQLRKIQIV NEANKDLVIE ALRSIAEILT YGDQHDPLFF EFFMEKQVMG EFVRILRVSK TVTVSVQLLQ TMSIMIQNLK 101: SEQAIYYLFS NEYVNYLITY TFDFQHEELL SYYISFLRAV SGKLNKHTIS LLLKTENDVV VSFPLYVEGI QFAFHEENMI RTAVRALTLN VYHVGDESVN 201: DYVVSPPHTE YFSKLISFFQ KQCMDLSAMV LNTLKSPSPD SGGKLFSAVD GIEDTLYYFS DVISAGIPDI GRLITDHILQ HLTLPLLLPS LCSEAVNDIS 301: VDPVTSLYLL SCILRIVKIK DLANMTAATL FCPVKAFISS SLVKPNSSLA PEGLTYVNGH PDKGVTEEAN QQCSSTAAGM SDDGNSHLCS EDTPKSIFNN 401: SHMTFRETLL QYISEGDDVQ AQGSLFVLAT LLQTKELEES MLDAFGILPQ RKQHKKLLLQ SLVGEDTGEE QLFSPRNGSM RDGLSSELDW YLRRLEEQFG 501: VCCSLPGAAR CPRVHRHQVV DTLVTLLCRE NISAETLWDG GWLLRQLLPY SEAEFNRKHL KMLNVSYEKC KNSLTREIKG IWPDLLIRVL LDEWRKCKRV 601: IEAPSPQKEP KSVLLQLDRS SSNDNSVSES SFTAGERMCE VVKVFVLLHQ LQIFSLGRSL PEQPPIYPPA DRSETSRATR AGLDVSVPKP GTELKLVDAV 701: PCRIAFERGK ERDFSFLALS SGESGWIVLA DPDNGIVRVT APLAGCKPRI DEKHPRWLHL RIRPSTLPLL DPTKRGVYEK LKSKGLVDGR WILAFRDDES 801: CHSAYSMVAG EIDLQCSEVE RRLRPLFDLE RNQLEDQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)