AT3G03810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
embryo sac development arrest 30 (EDA30); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, polar nucleus fusion, pollen tube development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT3G30300.1); Has 810 Blast hits to 792 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 810; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:972190..975901 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75041.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.76 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||
| Length | 656 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVFKSRIKWI ALFVLILSMG SLVVHLSMTK SSGVQLAYSA RDNLWQDFDS LLGAQDFRNK HLWRPVKSLE TLQPYANPRN SYPAPSSKNN GFIYAKIFGG 101: FDKIRSSICD LVTISRLLNA TLVIPELQES LRSKGISNKF KSFSYLYDEE QFIAFLKNDV IVMKTLPESL KAARKRNEFP LFKPKNSASP KFYLEDVLPK 201: LKKANVIGLI VSDGGCLQSA LPASMPELQR LRCRVAFHAL QLRPEIQVLA KEMVDRLRKS GQPFLAYHPG LVREKLAYHG CAELFQDIHS ELIQYRRAQM 301: IKQRFILEEL IVDSRLRRDN GLCPLMPEEV GILLKALGYS QKAIIYLAGS EIFGGQRVLI PLRAMFPNLV DRTSLCSTEE LSELVGPETP LPENTYKMPP 401: RKSDKQLKEE WNKAGPRPRP LPPPPDRPIY QHEKEGWYGW LTENDTEPSP SPMDLRNQAH RLLWDALDFA VSVEADVFFP GFNNDGSGWP DFSSLVMGQR 501: LYERPSSRTY RLDRKVIQEL FNITREDMYH PNRNWTLRVR KHLNSSLGES GLIRQSMLSK PRSFLSHPLP ECSCRTSALE DSRQIQSDDG RFLYGGEDEC 601: PKWIKSAGVE KSKTDDGDQP DYDHDLLAEQ SETEEEFAKS KVASAFDQDE EWDPND |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)