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AT5G54830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein; FUNCTIONS IN: dopamine beta-monooxygenase activity, monooxygenase activity; INVOLVED IN: histidine catabolic process, metabolic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Electron transfer DM13 (InterPro:IPR019545), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593), DOMON (InterPro:IPR013050); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G61750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSWZeggNOG:KOG4293eggNOG:KOG4731EMBL:AB005232
EMBL:AK227031EMBL:AY090233EMBL:BT002628EMBL:CP002688
EnsemblPlants:AT5G54830EnsemblPlants:AT5G54830.1entrez:835573GeneID:835573
Genevisible:Q9FFU6GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0016021GO:GO:0046872GO:GO:0055114Gramene:AT5G54830.1
hmmpanther:PTHR23130hmmpanther:PTHR23130:SF84HOGENOM:HOG000241990InParanoid:Q9FFU6
InterPro:IPR005018InterPro:IPR006593InterPro:IPR019545iPTMnet:Q9FFU6
KEGG:ath:AT5G54830OMA:SGVCPDKPaxDb:Q9FFU6Pfam:PF03188
Pfam:PF03351Pfam:PF10517Pfam:Q9FFU6Pfscan:PS50836
Pfscan:PS50939Pfscan:PS51549PhylomeDB:Q9FFU6PRIDE:Q9FFU6
PRO:PR:Q9FFU6PROSITE:PS50836PROSITE:PS50939PROSITE:PS51549
ProteinModelPortal:Q9FFU6Proteomes:UP000006548RefSeq:NP_200294.1SMART:SM00664
SMART:SM00665SMART:SM00686STRING:3702.AT5G54830.1TAIR:AT5G54830
TMHMM:TMhelixUniGene:At.29474UniProt:Q9FFU6
Coordinates (TAIR10) chr5:+:22273394..22276117
Molecular Weight (calculated) 100538.00 Da
IEP (calculated) 5.44
GRAVY (calculated) -0.21
Length 907 amino acids
Sequence (TAIR10)
(BLAST)
001: MCDQRPNLLG SLVLLGFFIF FVNGEECSNS SSLIGHESEF KMLQHQLRGV FTVVDDCSFR VSRFDMLSGS EVHWWGAMSS DFDNMTNDGF VISDQKLNQT
101: FKNSSFIVRL LGNVTWDKLG VVSVWDLPTA SDFGHVLLSN ATESDTSKAE SPPSESNDVA PGKSNNSEPF KAPTMFDNCK KLSDKYRLRW SLNAEKGYVD
201: IGLEATTGLL NYMAFGWAKP NSTSNLMLNA DVVVTGIRED GFPFADDFYI TESSVCSVKE GTATGVCPDT VYEEADSVGS SVNNTKLVYG HRIDGVSFVR
301: YRRPLNDSDN KFDFPVNSTE SLTVIWALGV IKPPDVINPY YLPVNHGGVE SENFGHFSLN LSDHVDECLG PLDADNKYDQ DVIIADAHAP LVVTAGPSVH
401: YPNPPNPSKV LYINKKEAPV LKVERGVPVK FSIEAGHDVS FYITSDFLGG NASLRNRTET IYAGGQETHG VLSSPSELVW APNRNTPDQL YYHSIFQEKM
501: GWKVQVVDGG LSDMYNNSVN LDDQQVKFFW TIVGDSISIA ARGEKKSGYL AIGFGSEMTN SYAYIGWFDR NGTGHVNTYW IDGESASAVH PTTENMTYVR
601: CKSEEGIITL EFTRPLKPSC SHRDRPECKN MIDPTTPLKV IWAMGAKWTD GQLTERNMHS VTSQRPVRVM LTRGSAEADQ DLRPVLGVHG FMMFLAWGIL
701: LPGGILSARY LKHIKGDGWF KIHMYLQCSG LAIVFLGLLF AVAELNGFSF SSTHVKFGFT AIVLACAQPV NAWLRPAKPA QGELISSKRL IWEYSHSIVG
801: QSAVVVGVVA LFTGMKHLGE RNGTENVDGL NLALGLWVFL CVVTVAYLEY RERGRRRARN LSRGNWVLGN VEEDDSIDLI DSRGGFRDKD DEDRNGGRME
901: IQLEPLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)