AT2G01480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.682 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14970.1); Has 836 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 836; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:216980..220341 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64552.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.09 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||
| Length | 567 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLAKNRLPGS GHTTPSPPAS PRRSPRYRHG RSKAAAGSRF PTVQPSRTLA HRLSWILLSV LLRRQGIFLF APLIYISCML LYMGTVSFDV VPIIQRRPPP 101: GSVYKSPQVY AKLRPEMDAD NSTADAITTI WKHSYKGGEW KPYVNKSTGD LPESNGYIYV EANGGLNQQR TSICNAVAVA GYLNATLVIP NFHYHSIWRD 201: PSKFGDIYDE EFFVSTLSND VRVVDTIPEY LMERFDHNMT NVYNFRVKAW SPIQYYRDSI LPKLLEEKII RISPFANRLS FDAPQAVQRL RCLANYEALK 301: FSKTILTLGE TLVKRMKEQS ANHGAKYVSV HLRFEEDMVA FSCCIFDGGN QEKQDMIAAR ERGWKGKFTK PGRVIRPGAI RQNGKCPLTP LEVGLMLRGM 401: GFNKSTYIFL ASGEIYDANR TMAPLLEMFP NLQTKEMLAS EEELAPYKNF SSRMAAIDYT VCLHSEVFVT TQGGNFPHFL MGHRRYMFGG HSKTIRPDKR 501: KLAILFDNPN IGWRSFKRQM LNMRSHSDSK GFELKRPNDS IYTFPCPDCM SRRNKTTTPE SRPPPAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)