AT1G09980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.940 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Putative serine esterase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Putative serine esterase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G58350.2); Has 480 Blast hits to 383 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 283; Fungi - 2; Plants - 87; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3256541..3260866 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 92072.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.10 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||
| Length | 802 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLRRLGWLIG LSQRSRQTKS IDAEPYVARV KPVLMIDTVQ EIAIYIHRFH NLDLFQQGWY QIKISMRWED GDNNSCGIPS RVVQYEALDS TSNDSYGVWK 101: IDDKDSSFLT QPFRIKYARQ DVRLCMMVSF TMPLERYEGS ATSAVILKFE LLYSPIMEDI PVTHSDACAA AVHEFRIPPK ALSGVHSYCP VHFDTFHAVL 201: IDVSVHVSVM KSAAYKRPAI LSSDASNGKN LTSGNIQSSK KAFTQIASAD KKLVSFVKAL LGARDTLLEE MQRLSKAVGQ TVDLSEFVSS MDNALLSDSG 301: STGKSVEVEG SGQGKLQNNL EKLNGPFDLA SDDWLHNFSK EHLSRTFHLL GTQLHYLWNT FLTLHRDNYT KILEYLRDIW TKDRRAEWSI WMVYSKVEMP 401: HHFISGMEDI SNHSSHKRVS TGLKLNDPAQ VASTRAELHR RSIAQMRINN RAIQDMHIFG DPMRVPIVII ERVWNAPRRT FSDNSYMRHV DRIDSSLLNG 501: HDDESGTKKH INPQHTGREL KIVVFVHGFQ GHHLDLRLIR NQWLLIDPKI EFLMSEANEE RTHGDFREMG QRLAQEVVSF FKRKKDKHAR YGRLKNIKLS 601: FVGHSIGNVI IRAAIADSLM DPYRKYFHTY ISLSGPHLGY LYSSNSLFNS GLWLLKKLKS TQVIHQLTLT DDPDLQNTFF YKLCKQKTLC SFKNIILLSS 701: PQDGYVPYHS ARIESCQPAS FDNSKRGVAF LEMLNNCMDQ IRGPSPETPH HQRVFMRCDV NFDTTLYGRN LNSFIGRAAH IEFLESDVFA RFIMWSFQDL 801: FR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)