AT3G14205.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.523 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Phosphoinositide phosphatase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Phosphoinositide phosphatase family protein; FUNCTIONS IN: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2094 Blast hits to 1659 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 836; Fungi - 659; Plants - 270; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:4716008..4720524 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 91637.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 808 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAASERSIDK EVDMGSSFLQ KFRLYETRSS FYMIGRDKNR TSWRVLKLDR TEPAEVNIYE DSTAYTEAEC FETLRRIHEG NRSSGGLKFV TTCYGIIGFI 101: RFLGPYYMLI ITKRKKLGEI CGHTVYGVAK SKIITIPHAS VLSNVAYSKD EKRYKRLLCT VDLTKDFFFS YSYHIMHTLQ RNLSNNVEGH TYYESMFVWN 201: EYLTRRIRNN VKDCMWTVAL VYGFFKQVKL SVSEKNFRLT LISRRSRHYA GTRYLKRGVN EKGRVANDVE TEQIVFEEAQ DGNPGRISSV VQNRGSIPLF 301: WSQETSRLNI KPDIILSPKD PNFEATRLHF ENLGRRYGNP IIILNLIKTR EKRPRETILR AEFANAIRFI NKGLSKEDRL RPLHWDLHKH SRKKGTNVLA 401: ILGRLATYAL NLTSIFYCQL TPDLRGEGFQ NQNPSTLEND DGECSTYDPP SKDETAPNLV VENGNDSKDA KEDQQKEVTM LQKGVLRTNC IDCLDRTNVA 501: QYAYGLVAFG RQLHALGLTE STNIDLDNPL AEDLMGIYET MGDTLALQYG GSAAHNKIFC ERRGQWRAAT QSQEFFRTLQ RYYSNAYMDA EKQDAINVFL 601: GYFQPQSDKP ALWELGSDQH YNAARFLANS VPETSRSTMK RSLSESSIIS ESSPAALGPV GRHGLAEKDE EVKGLSDSAP EISTSETAKI AASLSAPPPI 701: LEELGLDDIL ENDCFCCDGN GEQCTCAAFD MDWVSSSGNS CEDESCGRAT VVRSFETIPE SRKIESEICV VETVGSNSRK GNKEEEEAIS GIPEGYVRWV 801: MDEDGHFW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)