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AT4G33240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21173023 (2011): Golgi trans-Golgi network
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases
Curator
Summary (TAIR10)
Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization.
Computational
Description (TAIR10)
FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 9196 Blast hits to 8390 proteins in 488 species: Archae - 593; Bacteria - 340; Metazoa - 3784; Fungi - 1828; Plants - 987; Viruses - 3; Other Eukaryotes - 1661 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33240-MONOMERBioCyc:ARA:GQT-2800-MONOMERBioCyc:ARA:GQT-2801-MONOMEREC:2.7.1.150
eggNOG:COG0459eggNOG:COG5253eggNOG:KOG0230EMBL:AK227081
EMBL:AL035525EMBL:AL161583EMBL:CP002687EnsemblPlants:AT4G33240
EnsemblPlants:AT4G33240.1entrez:829460ExpressionAtlas:Q0WUR5Gene3D:3.30.40.10
Gene3D:3.30.800.10Gene3D:3.30.810.10Gene3D:3.50.7.10GeneID:829460
Genevisible:Q0WUR5GO:GO:0000285GO:GO:0005524GO:GO:0005768
GO:GO:0007033GO:GO:0010008GO:GO:0010256GO:GO:0046854
GO:GO:0046872hmmpanther:PTHR11353hmmpanther:PTHR11353:SF93HOGENOM:HOG000241144
InParanoid:Q0WUR5InterPro:IPR000306InterPro:IPR002423InterPro:IPR002498
InterPro:IPR011011InterPro:IPR013083InterPro:IPR017455InterPro:IPR027409
InterPro:IPR027483InterPro:IPR027484iPTMnet:Q0WUR5OMA:YQVSSKH
PaxDb:Q0WUR5Pfam:PF00118Pfam:PF01363Pfam:PF01504
Pfam:Q0WUR5Pfscan:PS50178Pfscan:PS51455PhylomeDB:Q0WUR5
PIR:T05204PRIDE:Q0WUR5PRO:PR:Q0WUR5PROSITE:PS50178
PROSITE:PS51455ProteinModelPortal:Q0WUR5Proteomes:UP000006548Reactome:R-ATH-1660514
Reactome:R-ATH-1660516Reactome:R-ATH-1660517RefSeq:NP_195050.6SMART:SM00064
SMART:SM00330STRING:3702.AT4G33240.1SUPFAM:SSF52029SUPFAM:SSF56104
SUPFAM:SSF57903TAIR:AT4G33240tair10-symbols:FAB1AUniGene:At.28052
UniProt:Q0WUR5
Coordinates (TAIR10) chr4:-:16029504..16037278
Molecular Weight (calculated) 196203.00 Da
IEP (calculated) 5.90
GRAVY (calculated) -0.51
Length 1757 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDSQDHKAPG FVDIVKSWIP RKSESSNMSR DFWMPDQSCP VCYECDAQFT VFNRRHHCRL CGRVFCAKCA ANSIPSPSDE TKDSHEEPER IRVCNYCYKQ
0101: WEQGIVPPDN GASIISLHFS SSPSARSVAS TTSNSSNCTI DSTAGPSPRP KMNPRASRRV SSNMDSEKSE QQNAKSRRSS DHYGHVLDSS DNQVEFFVNS
0201: SGRSDGEADD DDDYQSDFAQ SYAQGNDYYG AINLDEVDHI YGSHEAHDVG VKIEPNISGF PPDQDLDSLN TETIDKTRQQ ENGWNDVKEG SPPCEESFEP
0301: EVVDFESDGL LWLPPEPENE EDEREAVLSD DDGDEGDRGD WGYLRPSNSF NEKDFHSKDK SSGAMKNVVE GHFRALVAQL LEVDNLPMVN EGDEEGWLDI
0401: ITSLSWEAAT LLKPDTSKSG GMDPGGYVKV KCIPCGRRSE SMVVKGVVCK KNVAHRRMTS KIEKPRLLIL GGALEYQRIS NQLSSFDTLL QQEMDHLKMA
0501: VAKIDSHNPD ILLVEKSVSR FAQEYLLAKD ISLVLNIKRS LLERISRCTG AQIVPSIDQL TSPKLGYCDL FHVEKFVETH VSPCQVAKKM AKTLMFFDGC
0601: PKPLGCTILL KGAHEDELKK VKHVIQYGVF AAYHLALETS FLADEGASIH ELPLQTPITV ALPDKPSMVN RSISTIPGFT VSSAEKSPTT ELRGEPHKAN
0701: GDLTGNFTSS KTHFQGKLDG NDRIDPSERL LHNLDTVYCK PPETITSKDD GLVPTLESRQ LSFHVEEPSV QKDQWSVLSG ATEQVTDGGY TNDSAVIGNQ
0801: NFNRQEQMES SKGDFHPSAS DHQSILVSLS TRCVWKGSVC ERAHLLRIKY YGSFDKPLGR FLRDNLFDQD QCCPSCTMPA EAHIHCYTHR QGSLTISVKK
0901: LPELLPGQRE GKIWMWHRCL KCPRINGFPP ATRRIVMSDA AWGLSFGKFL ELSFSNHAAA SRVANCGHSL HRDCLRFYGF GRMVACFRYA SINIYAVTLP
1001: PAKLYFNYEN QEWLQKESKE VIKKAEVLFN EVQEALSQIS AKTMGAGSKG STPNKIKLSL EELAGLLEQR KKEYKDSLQQ MLNVVKDGQP TIDILLINKL
1101: RRLIIFDSYA WDECLAGAAN MVRNNYLEAP KNSAPKVMGR NVSLEKLSDE KVKSIPTHVA ICNDSLLQDA DYETCLNQGK SFADTSGKFA IPEDVGSDRP
1201: PDCRMEFDPS EGGKDNFVES SQVVKPAHTE SQFQATDLSD TLDAAWIGEQ TTSENGIFRP PSRAASTNGT QIPDLRLLGS ESELNFKGGP TNDEHTTQVQ
1301: LPSPSFYYSL NKNYSLNSRK HIMAEDRPVY VSSYRELEWR SGARLLLPLG CNDLVLPVYD DEPTSIIAYA LTSSEYKAQM SGSDKSRDRL DSGGSFSLFD
1401: SVNLLSLNSL SDLSVDMSRS LSSADEQVSQ LLHSSLYLKD LHARISFTDE GPPGKVKYSV TCYYAKEFEA LRMICCPSET DFIRSLGRCR KWGAQGGKSN
1501: VFFAKSLDDR FIIKQVTKTE LESFIKFGPA YFKYLTESIS TKSPTSLAKI LGIYQVSSKH LKGGKEFKMD VLVMENLLFK RNFTRLYDLK GSTRARYNPD
1601: TSGSNTVLLD QNLVEAMPTS PIFVGSKAKR LLERAVWNDT SFLASIHVMD YSLLVGVDEE RNELVLGIID FMRQYTWDKH LETWVKTSGL LGGPKNSTPT
1701: VISPQQYKKR FRKAMTAYFL MVPDQWSPAA VVPSNSSSAE VKEEEEKDNP QAVGNKS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)