AT4G33130.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:15979437..15980655 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 25349.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.44 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.73 | ||||||||||||||||||||||||
| Length | 222 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLCIKAEALH EDQNLASSSS SPSTDRTFGN ATFRLPINWG SSIRRYLKKT GTFSRRSYSS GDGSLFFPDL DESKMIDQTS GRFDGKTKLW YKCELEQDIK 101: RLQQQLQEEI NLRLALTSAV EHSSSPFMDS PCELPDKAQE LLDSLAILEI TVSKLEQESV SLRYLLRQEK NERRLSEILQ KKSHYSAPSK FTNAQNFPNK 201: SVTRKRESKQ VDSLDSEALQ VE |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)