suba logo
AT4G24265.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 0.858
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8AVeggNOG:ENOG411153UEMBL:BT015061EMBL:BT015656
EMBL:CP002687EnsemblPlants:AT4G24265EnsemblPlants:AT4G24265.1entrez:828528
GeneID:828528Gramene:AT4G24265.1HOGENOM:HOG000142240KEGG:ath:AT4G24265
OMA:WSRKKRKPhylomeDB:Q6DBG1Proteomes:UP000006548RefSeq:NP_680736.1
STRING:3702.AT4G24265.1TAIR:AT4G24265UniGene:At.45333UniProt:Q6DBG1
Coordinates (TAIR10) chr4:-:12580740..12581162
Molecular Weight (calculated) 15978.10 Da
IEP (calculated) 8.38
GRAVY (calculated) -0.36
Length 140 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKLTFWSRK KRKRKQACPS QPHHCSCEYS STAVAVLVEP TAPPLPYWFD ETRSLCPPET SSFPWTTHHL PHQQEETIVE ATPLLSQVSD LRIYQSYQQY
101: MVPNPTSNVH FVEPATAKRS VGIFGCVIEL SSSLVRCFIP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)