AT3G60840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.548 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : microtubule-associated protein 65-4 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
microtubule-associated protein 65-4 (MAP65-4); INVOLVED IN: anaphase; LOCATED IN: nucleus, vacuole, preprophase band, phragmoplast, spindle; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: Microtubule associated protein (MAP65/ASE1) family protein (TAIR:AT5G51600.1); Has 9353 Blast hits to 7282 proteins in 721 species: Archae - 305; Bacteria - 1033; Metazoa - 4598; Fungi - 860; Plants - 701; Viruses - 22; Other Eukaryotes - 1834 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22477573..22480463 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73451.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 648 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGETEDEKDA SLADIEKECL SVYKRKVEEA SRGKANLLKE IAVGRAEIAA IGSSMGGQEI HSNSRLGENL KEELENVNVQ LDGLRKRKAE RMIRFNEVID 101: QLLKLSLQLG NPTDYLKKFA AEETDLSLQR LEELRSQLGE LQNEKSKRLE EVECLLKTLN SLCSVLGEDF KGMIRGIHSS LVDSNTRDVS RSTLDKLDMM 201: IVNLREAKLQ RMQKVQDLAV SLLELWNLLD TPAEEQKIFH NVTCSIALTE SEITEANILS VASIKRVEDE VIRLSKIKIT KIKEVILRKR LELEEISRKM 301: HMATEVLKSE NFSVEAIESG VKDPEQLLEQ IDSEIAKVKE EASSRKEILE KVEKWMSACE EESWLEEYNR DDNRYNAGRG AHLTLKRAEK ARLLVNKLPG 401: MVEALTAKVT AWENERGNEF LYDGVRVLSM LGQYKTVWEE KEHEKQRQRD MKKLHGQLIT EQEALYGSKP SPNKSGKKPL RTPVNAAMNR KLSLGGAMLH 501: QSLKHEKATL NSKRTKYYDQ NATSRRDSAL PTLSGRRNSE LPGRIRSKNV PVAGKAARSP MLRKPLSPVT SNILNSPEDH HKDAYTTKER ILTPKTNEEK 601: KRAVPTTPAA SVAMTEATTP FTPAVEKRMD EEDVIVEYSF EEVRAGFC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)