AT1G76740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits to 2942 proteins in 407 species: Archae - 9; Bacteria - 440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses - 8; Other Eukaryotes - 1293 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:28805235..28810477 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 169365.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.82 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.76 | ||||||||||||||||||||||||
| Length | 1532 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNFHGMKRKD LQALCKKNGI PANLKNIEMA TRLASVLQKE TEGTLTDTIS LSEDSVDVLE DDVAVKKVRF SPENEVFEFT RSLKRCQRKY VSKRKVQESG 0101: IELRRSKRSV AKGKAIAGSS ENESNTRRGN RSDVTKAIEV PRRSKRSGST GSSQEDCKVT ELMALEQFEF ENISEGLSGS DQDGFKFEKI GRRSTQLISK 0201: TGNLLPVNKS KRLVDIKDNE DELVKNNVNE VSMDQRRSIR LKARAANQSM GGESSDGRPL CSAKETKEEI KIKQSKRSTV VSSQKELVER KAKEPLVDSK 0301: VPRRSKRLAN DVNVLLDKRP VKAVKPDYLK VKKAPKQSRR LEKSLSELLI DGQAQKGDKQ RTFGNGREGK KLLRSSKHTA SNNMLGQALS NSLKRCSVID 0401: GERAGVSVGD VKKSNVNNEM QIRVRVTRNS SRHHSFKAPI EFERNLIEKK SDETFVKSSK RGTRRMKRGR SAEPGKDIET QSNLTSKKLL NEYTQFEQEE 0501: ACDANVEVRG SSKKAKTMNQ ECVKDIPQVM TENSPSSSET IAAESVMIVE NVLDSSPEKS VDSSQRTNTQ ELNSEVMEGK HEEKLEGDTV LMVAIEEEKK 0601: EVSSSSVLLS ERLSPTSVQF AVSNSKAELV VPTGHILLND FAEENSKTKE EGLIFTPVSE LKEPISVEAI LENSVECWNE IHLSKHDEKG TNIQAENLHG 0701: NFSECNTENS KVVIVHPEML DEISVSHCVD LEMLDEVKNG NLEKSEQRSG CKLNPLELKR FSSTDFTSHS LKEKKVSKCF KEDELRAWSE PLPRNKNASA 0801: FDELAIFTTP ERNLMLRGKL SENGKTLAAD SVIHHNVIAV ESHAVVFTAS KQAGTDEAGK EEEHTATNFP DESDVFNTTK KLGGSRQTEA RNEGESIVVE 0901: LHDESDIATS LERQLSAGDS KGEGIGRNEE NMTVELHCEP DTCTSPDGHT LLGNYVSDGA ENSEENKAME FNDESVDLTA SERHEICRSF GQDRARESEG 1001: KKVVLFYEES LHSDQPLADS ELGEAECQEI NSADKSSLFT SLERQQLFYE CYVPNVREDS ERDEAATSEE NKAVELQVDC GIFTTPEKHL LLETDEGVKG 1101: DNITAKSHVL SDVLAADVPH SLMGDSEPDE AEKTSVEIKD VELLGESNSS TNPESPTLFG NSELDESRDS SAATCEEAFV TTSPEKELLI NPGKQEQKEV 1201: DENVVQESHV AAPDFRGNTI VDSSGGIASK VSYNHELNAG QETACAELMS KGSQAEDVVG LDATQGTSKK RRGHSPHADS VNLFDSNIEE VDTIMEAERN 1301: ISFSSYVAVP AEGNSETIGE ISSYLEVAGT CSMVFDESGS STDIQNQIND ALKEWAITDK NEADELIEAI VTKNIQKDFE GNLLLNSSGG GSNVSGETSI 1401: LAGTADEDEA AGPIAIAFVK AMSLTPDELT VKNHMNEKAA DEEMITRETT PIPEETINES SENRKEYSSI DESATLSEMQ VRREPTLIFR TQVKPTKHDM 1501: KENAPNSKIV HNLNVTAPRT SKRQPLQDLN KN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)