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AT1G07880.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.889
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
member of MAP Kinase
Computational
Description (TAIR10)
ATMPK13; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 5 (TAIR:AT4G11330.1); Has 121340 Blast hits to 120172 proteins in 4531 species: Archae - 84; Bacteria - 12928; Metazoa - 46067; Fungi - 12050; Plants - 29427; Viruses - 570; Other Eukaryotes - 20214 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G07880EnsemblPlants:AT1G07880.1entrez:837303hmmpanther:PTHR24055
hmmpanther:PTHR24055:SF185Pfam:PF00069Pfscan:PS50011scanprosite:PS00107
scanprosite:PS00108scanprosite:PS01351tair10-symbols:ATMPK13
Coordinates (TAIR10) chr1:-:2434706..2435712
Molecular Weight (calculated) 29455.60 Da
IEP (calculated) 5.42
GRAVY (calculated) -0.26
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKREDGGIL TYDGRYVMYN VLGNIFELSS KYIPPIEPIG RGAYGIVCCA TNSETNEEVA IKKIANAFDN RVDAKRTLRE IKLLSHMDHD NVIKIKDIIE
101: LPEKERFEDV YIVYELMDTD LHQIIRSTQT LTDDHCQYFL YQILRGLKYI HSANVLHRDL KPSNLVLNTN CDLKICDFGL ARTSNETEIM TEYVVTRWYR
201: APELLLNSSE YTGAIDIWSV GCIFMEILRR ETLFPGKDYV QQLKLITEVS KLKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)