AT5G01370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ALC-interacting protein 1 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Nuclear protein with a lysine-rich domain and a C-terminal serine-rich domain. Interacts with Alcatraz (ALC). ACI1 is mainly expressed in the vascular system. Involved in cell separation during fruit dehiscence. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ALC-interacting protein 1 (ACI1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:152575..154295 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48126.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.16 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.96 | ||||||||||||||||||||||||||||
| Length | 427 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTQRANPKTG CLTAVVRRLL CSGSQQTHPS DNILDSDETL QLLISYEENE EPKKEIKTET ETQNDDVSLH PPPPPPPPNV VAKLMGLDHP APGSKRFRYF 101: DDSGSAVTRS KSVNFMDYIL KGHEEEEENE DEKDGQRQCR RVKASVSFRE IVPTSARWSS NNQQKKHDFL LLYLDKLDEK RELVGSSSFS RSKRFEKVVE 201: DSKKPPLPPS APKKKENEKV AKKFKDEPRK VAKKKKSENR NDVNGAKKVR WFLSPSKSKS SSEKTALLGE SKNIRADEFI GKESESPENK SNASPVSVLD 301: RDLYDYLILD DDYYFSGGDS ESASELSTKQ VETATKSSCS SSPAKTKTST KKENNNSTNN DSEETEFITK LMNMLSDLSE EDMKSSTWVS TSSTKPVDFT 401: QVEDFCVEFG QEILDLVMDQ LVDELCI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)