AT1G21810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF869) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G77580.1); Has 79141 Blast hits to 43153 proteins in 2526 species: Archae - 1269; Bacteria - 11097; Metazoa - 38829; Fungi - 6739; Plants - 4917; Viruses - 325; Other Eukaryotes - 15965 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:7656578..7658634 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70979.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.70 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||||||
| Length | 628 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTGTTLILEP VMDSKDELVK QHAKVAEDAV AGWEKAENEV VELKQKLEDA ADKNIVLEDR VSHLDGALKE CVRQLRQFRD EQEKNIQAAV TESTKELHSA 101: NTGLEKRVLE LQKEAEAAKS ENMMLRREFL TQREDLEIVM IERDLSTQAA ETASKQHLDI IKKLAKLEAE CRKLRILAKT SSSLSSNQSV DSHSDGGRER 201: VEGSCSDSWA SSAFISELDQ IKNEKGGNRS LQGTTSSTEI DLMDDFLEME RLVALPTETQ AKNSKDGYEL SLMEKLEKIQ AEKDDLEREV KCCREAEKRL 301: SLEIEAVVGD KMELEDMLKR VEAEKAELKT SFDVLKDKYQ ESRVCFQEVD TKLEKLQAEK DELDSEVICC KEAEKRFSLE LEAVVGDKIE MEDELEKMEA 401: EKAELKISFD VIKDQYQESR VCFQEVEMKL EAMKRELKLA NESKTQAESR VTRMEAEVRK ERIVSDGLKE KCETFEEELR REIEEKTMIK REKVEPKIKQ 501: EDIATAAGKF ADCQKTIASL GKQLQSLATL EEFLIDTASI PGSARSVHNK EALLGKDPHE CIKTINGRSL EFLAIQNSNN KTSPPCSSSS DSTTVSLIMS 601: SNRGSSEKNR NGFATVFTRS RNSVNLGI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)