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AT5G58630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6B2eggNOG:ENOG410ZCW9EMBL:CP002688EnsemblPlants:AT5G58630
EnsemblPlants:AT5G58630.1entrez:835977GeneID:835977Gramene:AT5G58630.1
hmmpanther:PTHR35499hmmpanther:PTHR35499:SF2InParanoid:F4KGA5InterPro:IPR032795
KEGG:ath:AT5G58630OMA:MCTSKSAPaxDb:F4KGA5Pfam:PF14383
PRIDE:F4KGA5ProteinModelPortal:F4KGA5Proteomes:UP000006548RefSeq:NP_200671.1
STRING:3702.AT5G58630.1TAIR:AT5G58630UniGene:At.49189UniGene:At.68520
UniProt:F4KGA5
Coordinates (TAIR10) chr5:-:23696141..23697335
Molecular Weight (calculated) 42545.10 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.85
Length 372 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMKSSPSPA SSLSLGSKTR SFGCISIILQ RFLCSGTSST YPSDLITEPS FKSRDFIPEP LRGRGDGPGA VARLMGLDSI PVIDKTRFLS RSHSVNHLKR
101: DDDEIQGKHR RVKSTLEYVE LEDDDFFILS FEKDKNDKEL GTRNCKKRRD TRENQSKTED QTHLEGKENN INAMNVSPGR ERLEIGELMQ RRKEKRKSRR
201: KRKETKLRQN IEKENWVQSN GCWSKEEDLV NCEVRSTKEE EECGSCDDSS PVSVLDYDRY AGVRVTPSPG NISRRRLSSE LESSKLNETI EQDHITLTSR
301: SKDQEIRLHG YQEMWLMICK LTVSDLEGSD WFNGKALKLE DIEGIISEDI VSNILDQLLE ETITTLSLTS QV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)