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AT4G22270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3537)
Curator
Summary (TAIR10)
Encodes a plasma membrane protein involved in the positive regulation of organ size development. Overexpression results in organ size enlargement.
Computational
Description (TAIR10)
MEMBRANE RELATED BIGGER1 (MRB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of cell division, organ growth; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT4G03820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS5CeggNOG:ENOG411194JEMBL:AY045956EMBL:AY142512
EMBL:CP002687EnsemblPlants:AT4G22270EnsemblPlants:AT4G22270.1entrez:828322
GeneID:828322GO:GO:0005886GO:GO:0016021GO:GO:0035265
GO:GO:0051302Gramene:AT4G22270.1hmmpanther:PTHR31963hmmpanther:PTHR31963:SF7
HOGENOM:HOG000239174InterPro:IPR021924KEGG:ath:AT4G22270OMA:LSWSVFF
Pfam:PF12056PhylomeDB:Q94AL2Proteomes:UP000006548RefSeq:NP_567659.1
STRING:3702.AT4G22270.1TAIR:AT4G22270tair10-symbols:ATMRB1tair10-symbols:MRB1
TMHMM:TMhelixUniGene:At.1975UniGene:At.1976UniProt:Q94AL2
Coordinates (TAIR10) chr4:+:11773396..11775782
Molecular Weight (calculated) 49796.60 Da
IEP (calculated) 7.76
GRAVY (calculated) 0.29
Length 437 amino acids
Sequence (TAIR10)
(BLAST)
001: MATNGSSEHL LPETTRPSAI INKQQPEFPA SRFTFMSLVL WFDQSNFGTA LLSWSVFFLL VVIVPLISHF LLVCSDCDFH HRRPYDVIVQ LSLSIFAGIS
101: FVSLSIWSRK FGMRRFLFLD KLWDVSDKVR IEYEAEIQRS LKRLMIFVLP SLTLEATYRI WWYISGFNQI PYIINPILSH VVACTLQLSS WLYRNSLFII
201: VCILYKITCH LQTLRLDDFA RCFASEITDV RSALGEHQKI RRNLRIVSHR FRRFILLSLI LVTATQFMAL LTTTRASVAV NIYEVGELAL CSLSLVTGVF
301: ICLRSATKIT HKAQSVTSLA AKWNVCATVD SFDHLDGETP TGSIIESQVS LRGNAIETSD DEEGEGDDDL DNTKIHPIYA NTISYQKRQA LVTYLENNKA
401: GITVYGFLVD RSWLNTIFGI ELALLLWLLN KTIVNIP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)