suba logo
AT4G22758.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1).
Protein Annotations
eggNOG:ENOG410Z7Z7eggNOG:KOG4197EMBL:AK221677EMBL:AL021635
EMBL:AL161557EMBL:CP002687EnsemblPlants:AT4G22758EnsemblPlants:AT4G22758.1
entrez:10723027GeneID:10723027Gramene:AT4G22758.1hmmpanther:PTHR33270
hmmpanther:PTHR33270:SF6HOGENOM:HOG000155318KEGG:ath:AT4G22758OMA:AHRLWNI
PaxDb:Q56XJ7Pfam:Q56XJ7PhylomeDB:Q56XJ7PIR:T04571
PRO:PR:Q56XJ7ProteinModelPortal:Q56XJ7Proteomes:UP000006548RefSeq:NP_001190802.1
STRING:3702.AT4G22758.1TAIR:AT4G22758UniGene:At.32500UniProt:Q56XJ7
Coordinates (TAIR10) chr4:+:11958477..11959904
Molecular Weight (calculated) 28546.30 Da
IEP (calculated) 10.91
GRAVY (calculated) -0.57
Length 255 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDSIHRRKV SNPVGNGGRS SRTRRTAFRY VSDKNNRSKS SNKVFERSFS EPSLNRHRDG QSNHLRRPSP MRGLPMEEET KPIVYLPRIR SEVFASSPSL
101: LNLYSPSSSS PINQEGNTKE APKVIISVAV EGSPGPVRAM VKLSCNVEET IKIVVDKYCK EGRTPKLDRD SAFELHQSHF SIQCLEKREI IGELGSRSFY
201: MRKKAPETGG SFAGISPART SLIPSSNLIG SCIAQLIGKI MRRTRRIWNI LVCVQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)