AT4G22070.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : WRKY DNA-binding protein 31 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of WRKY Transcription Factor; Group II-b | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
WRKY DNA-binding protein 31 (WRKY31); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:11691381..11694234 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 58544.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.94 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.72 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 538 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MFRFPVSLGG SRDEDRHDQI TPLDDHRVVV DEVDFFSEKR DRVSRENIND DDDEGNKVLI KMEGSRVEEN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM 101: DMEDKRAKIE NAQLQEELKK MKIENQRLRD MLSQATTNFN ALQMQLVAVM RQQEQRNSSQ DHLLAQESKA EGRKRQELQI MVPRQFMDLG PSSGAAEHGA 201: EVSSEERTTV RSGSPPSLLE SSNPRENGKR LLGREESSEE SESNAWGNPN KVPKHNPSSS NSNGNRNGNV IDQSAAEATM RKARVSVRAR SEAAMISDGC 301: QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA TAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS 401: SSMATISASA PFPTITLDLT NSPNGNNPNM TTNNPLMQFA QRPGFNPAVL PQVVGQAMYN NQQQSKFSGL QLPAQPLQIA ATSSVAESVS AASAAIASDP 501: NFAAALAAAI TSIMNGSSHQ NNNTNNNNVA TSNNDSRQ |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)