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AT4G23700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23430044 (2013): Golgi trans-Golgi network multivesicular body
  • PMID:23430044 (2013): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cation/H+ exchanger 17
Curator
Summary (TAIR10)
member of Putative Na+/H+ antiporter family
Computational
Description (TAIR10)
cation/H+ exchanger 17 (CHX17); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: N-terminal protein myristoylation, cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10581 Blast hits to 10541 proteins in 2184 species: Archae - 402; Bacteria - 8255; Metazoa - 59; Fungi - 207; Plants - 679; Viruses - 0; Other Eukaryotes - 979 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0475eggNOG:KOG1650EMBL:AL035394EMBL:AL161559
EMBL:AY926473EMBL:CP002687EnsemblPlants:AT4G23700EnsemblPlants:AT4G23700.1
entrez:828470GeneID:828470Genevisible:Q9SUQ7GO:GO:0005451
GO:GO:0005770GO:GO:0006623GO:GO:0006813GO:GO:0006885
GO:GO:0016021GO:GO:1902600Gramene:AT4G23700.1hmmpanther:PTHR32468
hmmpanther:PTHR32468:SF34HOGENOM:HOG000131548InParanoid:Q9SUQ7InterPro:IPR006153
iPTMnet:Q9SUQ7KEGG:ath:AT4G23700OMA:MELNERSPaxDb:Q9SUQ7
Pfam:PF00999Pfam:Q9SUQ7PhylomeDB:Q9SUQ7PIR:T05602
PRIDE:Q9SUQ7PRO:PR:Q9SUQ7ProteinModelPortal:Q9SUQ7Proteomes:UP000006548
RefSeq:NP_194101.1STRING:3702.AT4G23700.1TAIR:AT4G23700tair10-symbols:ATCHX17
tair10-symbols:CHX17TCDB:2.A.37.4.2TMHMM:TMhelixUniGene:At.2564
UniProt:Q9SUQ7
Coordinates (TAIR10) chr4:-:12342534..12345616
Molecular Weight (calculated) 89170.70 Da
IEP (calculated) 7.91
GRAVY (calculated) 0.37
Length 820 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTNGTTCPG PMKATSNGVF QGENPLEHAL PLLILQICIV LLLTRLLAFL LRPLRQPRVI AEIVGGILLG PSALGKSTKF INTVFPPKSL TVLDTLANLG
101: LIFFLFLVGL ELDPKSLKRT GKRALSIALA GITLPFVLGI GTSFALRSSI ADGASKAPFL VFMGVALSIT AFPVLARILA EIKLLTTDIG KIALSAAAVN
201: DVAAWILLAL AVALSGEGSS PLTSLWVFLS GCGFVLFCIF VVQPGIKLIA KRCPEGEPVN ELYVCCTLGI VLAASFVTDF IGIHALFGAF VIGVIFPKEG
301: NFANALVEKV EDLVSGLFLP LYFVSSGLKT NVATIQGAQS WGLLVLVIFN ACFGKIIGTV LVSLYCKVPL DQSLALGFLM NTKGLVELIV LNIGKDRGVL
401: NDQIFAIMVL MAIFTTFMTT PLVLAVYKPG KSLTKADYKN RTVEETNRSN KPLCLMFCFQ SIMNIPTIVN LIEASRGINR KENLSVYAMH LMELSERSSA
501: ILMAHKVRRN GLPFWNKDKS ENNSSSSDMV VVAFEAFRRL SRVSVRPMTA ISPMATIHED ICQSAERKKT AMVILPFHKH VRLDRTWETT RNDYRWINKK
601: VMEESPCSVA ILVDRGLGGT TRVASSDFSL TITVLFFGGN DDREALAFAV RMAEHPGISL TVVRFIPSDE FKPENVRIEI TEDQLCSGAT RLIDIEAITE
701: LKAKIKEKES SRSNSDSESH IIYEEKIVKC YEEVIEVIKE YSKSNLFLVG KSPEGSVASG INVRSDTPEL GPIGNLLTES ESVSTVASVL VVQQYIASRP
801: VGISKNVTTE ESLVEDSESP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)