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AT4G11650.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:18998720 (2009): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : osmotin 34
Curator
Summary (TAIR10)
osmotin-like protein
Computational
Description (TAIR10)
osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIHCeggNOG:ENOG410YD4XEMBL:AL049500EMBL:AL161532
EMBL:CP002687EMBL:X89008EnsemblPlants:AT4G11650EnsemblPlants:AT4G11650.1
entrez:826770Gene3D:2.60.110.10GeneID:826770Genevisible:P50700
GO:GO:0009651GO:GO:0009816GO:GO:0009817Gramene:AT4G11650.1
hmmpanther:PTHR31048hmmpanther:PTHR31048:SF19HOGENOM:HOG000238454InParanoid:P50700
InterPro:IPR001938InterPro:IPR017949iPTMnet:P50700KEGG:ath:AT4G11650
OMA:QCVANINPANTHER:PTHR31048PaxDb:P50700Pfam:P50700
Pfam:PF00314Pfscan:PS51367PhylomeDB:P50700PIR:T04212
PIRSF:PIRSF002703PRIDE:P50700PRINTS:PR00347PRO:PR:P50700
PROSITE:PS00316PROSITE:PS51367ProteinModelPortal:P50700Proteomes:UP000006548
RefSeq:NP_192902.1scanprosite:PS00316SMART:SM00205SMR:P50700
STRING:3702.AT4G11650.1SUPFAM:SSF49870TAIR:AT4G11650tair10-symbols:ATOSM34
tair10-symbols:OSM34TMHMM:TMhelixUniGene:At.25216UniProt:P50700
Coordinates (TAIR10) chr4:-:7025127..7026113
Molecular Weight (calculated) 26634.10 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.30
Length 244 amino acids
Sequence (TAIR10)
(BLAST)
001: MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP
101: NTLAEYALNQ FNNLDFYDIS LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG SCSDTEYSRF FKQRCPDAYS
201: YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV TEEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)