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AT3G09220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : laccase 7
Curator
Summary (TAIR10)
putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Computational
Description (TAIR10)
laccase 7 (LAC7); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1); Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53; Bacteria - 4205; Metazoa - 505; Fungi - 3603; Plants - 1597; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G09220-MONOMEREC:1.10.3.2eggNOG:COG2132eggNOG:KOG1263
EMBL:AC011436EMBL:AK117639EMBL:BT004971EMBL:CP002686
EnsemblPlants:AT3G09220EnsemblPlants:AT3G09220.1entrez:820078Gene3D:2.60.40.420
GeneID:820078Genevisible:Q9SR40GO:GO:0005507GO:GO:0016722
GO:GO:0046274GO:GO:0048046GO:GO:0052716Gramene:AT3G09220.1
hmmpanther:PTHR11709hmmpanther:PTHR11709:SF9HOGENOM:HOG000241916InParanoid:Q9SR40
InterPro:IPR001117InterPro:IPR002355InterPro:IPR008972InterPro:IPR011706
InterPro:IPR011707InterPro:IPR017761KEGG:ath:AT3G09220KO:K05909
OMA:TRGVIHYPaxDb:Q9SR40Pfam:PF00394Pfam:PF07731
Pfam:PF07732Pfam:Q9SR40PhylomeDB:Q9SR40PRIDE:Q9SR40
PRO:PR:Q9SR40PROSITE:PS00080ProteinModelPortal:Q9SR40Proteomes:UP000006548
RefSeq:NP_187533.1scanprosite:PS00080SMR:Q9SR40STRING:3702.AT3G09220.1
SUPFAM:SSF49503TAIR:AT3G09220tair10-symbols:LAC7TIGRfam:TIGR03389
TIGRFAMs:TIGR03389UniGene:At.40144UniProt:Q9SR40
Coordinates (TAIR10) chr3:-:2827434..2830477
Molecular Weight (calculated) 62406.40 Da
IEP (calculated) 9.19
GRAVY (calculated) 0.02
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVRVPIAC ALILLAISSI TSASIVEHTF NVQNLTVSRL CKRQVITVVN GSLPGPTIRV KEGDSLVIHV LNHSPHNITI HWHGIFHKLT VWADGPSMIT
101: QCPIQPGQRY AYRFNITGQE GTLWWHAHAS FLRATVYGAL VIRPKSGHSY PFPKPHKEVP ILFGEWWNTD VVALEEAAIA TGVPPNNSDA YTINGRPGNL
201: YPCSKDRMFS LNVVKGKRYL LRIINAAMNI QLFFKIANHR LTVVAADAVY TAPYVTDVIV IAPGQTIDAL LFADQSVDTS YYMAAHPYAS APAVPFPNTT
301: TRGVIHYGGA SKTGRSKPVL MPKLPSFFDT LTAYRFYSNL TALVNGPHWV PVPRYVDEEM LVTIGLGLEA CADNTTCPKF SASMSNHSFV LPKKLSILEA
401: VFHDVKGIFT ADFPDQPPVK FDYTNPNVTQ TNPGLLFTQK STSAKILKFN TTVEVVLQNH ALIAAESHPM HLHGFNFHVL AQGFGNYDPS RDRSKLNLVD
501: PQSRNTLAVP VGGWAVIRFT ANNPGAWIFH CHIDVHLPFG LGMIFVVKNG PTKSTTLPPP PPDLPKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)