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AT4G21460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ribosomal protein S24/S35, mitochondrial
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZX0YeggNOG:KOG3933EMBL:AK175114EMBL:CP002687
EnsemblPlants:AT4G21460EnsemblPlants:AT4G21460.1entrez:827418GeneID:827418
GO:GO:0005840Gramene:AT4G21460.1hmmpanther:PTHR13490InterPro:IPR019349
KEGG:ath:AT4G21460Pfam:PF10213PhylomeDB:Q683K3ProMEX:Q683K3
Proteomes:UP000006548RefSeq:NP_567628.2SMR:Q683K3STRING:3702.AT4G21460.1
TAIR:AT4G21460UniGene:At.32629UniGene:At.6712UniGene:At.75035
UniProt:Q683K3
Coordinates (TAIR10) chr4:+:11428530..11430390
Molecular Weight (calculated) 47556.80 Da
IEP (calculated) 4.70
GRAVY (calculated) -0.84
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGALFRNAS LCARRIILSS RISPNVPFLT PIAAPAPPKF RFFSSESGEN STTATESSPT DSSDKKDLVV EDVSNKELKS RIDKSFNEGN EDALPGVIEA
101: LLQRRLVDKH AETDDELMEK IESLPFKDDV KDEDFESDFE EAHSTDEELE DLYNSPEYVA EKMRKKEFFN MDDNKWDHMI REGIQHGCLT DTKQCEEILE
201: DMLKWDQLLP DDLKKKVEAK FNELGDMCER GEIEAEAAYE LFKEFEDEMV IQYGDQMEAE GPPQFGETDT SDRNTDLDDP SGKGPILRWQ SRIVFAPGGD
301: AWHPKNRKVK MSVTVKELGL SNHQAKRLRE LVGKRYHSGK DELTITCERF EHREENRKDC LRTLYGLIEE AGKANKIAED IRTSYVKQRL RASPAFMQKL
401: QAKIIRSKES NAINA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)