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AT5G06050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.595
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24344820 (2014): Golgi trans-Golgi network
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Putative methyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.1.1.-eggNOG:ENOG410Y3CWeggNOG:KOG0122EMBL:AB017060
EMBL:AK226215EMBL:AP002030EMBL:BT015368EMBL:BT020595
EMBL:CP002688EnsemblPlants:AT5G06050EnsemblPlants:AT5G06050.1entrez:830492
Gene3D:3.40.50.150GeneID:830492Genevisible:Q9FG39GO:GO:0000139
GO:GO:0008168GO:GO:0016021Gramene:AT5G06050.1hmmpanther:PTHR10108
hmmpanther:PTHR10108:SF789HOGENOM:HOG000238541InParanoid:Q9FG39InterPro:IPR004159
InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-
KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-
KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT5G06050
OMA:WIYKENDPaxDb:Q9FG39Pfam:PF03141Pfam:Q9FG39
Pfscan:PS51257PhylomeDB:Q9FG39PRIDE:Q9FG39PRO:PR:Q9FG39
ProteinModelPortal:Q9FG39Proteomes:UP000006548RefSeq:NP_196224.1STRING:3702.AT5G06050.1
SUPFAM:SSF53335TAIR:AT5G06050TMHMM:TMhelixUniGene:At.32910
UniProt:Q9FG39
Coordinates (TAIR10) chr5:+:1820196..1823572
Molecular Weight (calculated) 77715.10 Da
IEP (calculated) 7.26
GRAVY (calculated) -0.32
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLFLNSNLL RNSIFFKISA FVLISVACFF LGKHWSEDGF RRLIFFSAEP SRSPIVALSP DFGKTYNISG LIYESHPILP PSLSPPPPPD SVELKVFGIV
101: NENGTMSDEF QIGDYDVESA ETLGNQTEFE SSDDDDIKST TARVSVRKFE ICSENMTEYI PCLDNVEAIK RLNSTARGER FERNCPNDGM GLNCTVPIPQ
201: GYRSPIPWPR SRDEVWFNNV PHTKLVEDKG GQNWIYKEND KFKFPGGGTQ FIHGADQYLD QISQMIPDIS FGNHTRVVLD IGCGVASFGA YLMSRNVLTM
301: SIAPKDVHEN QIQFALERGV PAMVAAFTTR RLLYPSQAFD LVHCSRCRIN WTRDDGILLL EVNRMLRAGG YFVWAAQPVY KHEKALEEQW EEMLNLTTRL
401: CWVLVKKEGY IAIWQKPVNN TCYLSRGAGV SPPLCNSEDD PDNVWYVDLK ACITRIEENG YGANLAPWPA RLLTPPDRLQ TIQIDSYIAR KELFVAESKY
501: WKEIISNYVN ALHWKQIGLR NVLDMRAGFG GFAAALAELK VDCWVLNVIP VSGPNTLPVI YDRGLLGVMH DWCEPFDTYP RTYDLLHAAG LFSIERKRCN
601: MTTMMLEMDR ILRPGGRVYI RDTINVTSEL QEIGNAMRWH TSLRETAEGP HSSYRVLLCE KRFESSEKRR TKKRRKTKGK RA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)