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AT4G14490.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SMAD/FHA domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein (TAIR:AT3G02400.1); Has 1713 Blast hits to 1668 proteins in 445 species: Archae - 15; Bacteria - 1228; Metazoa - 80; Fungi - 66; Plants - 132; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7VZeggNOG:ENOG410ZNU1EMBL:AL161539EMBL:AY099748
EMBL:AY128865EMBL:CP002687EMBL:Z97336EnsemblPlants:AT4G14490
EnsemblPlants:AT4G14490.1entrez:827096EvolutionaryTrace:O23305Gene3D:2.60.200.20
GeneID:827096Genevisible:O23305Gramene:AT4G14490.1hmmpanther:PTHR23308
hmmpanther:PTHR23308:SF34HOGENOM:HOG000155331InParanoid:O23305InterPro:IPR000253
InterPro:IPR008984KEGG:ath:AT4G14490OMA:FSFLEGHPaxDb:O23305
PDB:1UHTPDBsum:1UHTPfam:O23305Pfam:PF00498
Pfscan:PS50006PhylomeDB:O23305PIR:B71407PRIDE:O23305
PRO:PR:O23305PROSITE:PS50006ProteinModelPortal:O23305Proteomes:UP000006548
RefSeq:NP_193185.1SMART:SM00240SMR:O23305SUPFAM:SSF49879
TAIR:AT4G14490UniGene:At.33274UniProt:O23305
Coordinates (TAIR10) chr4:-:8332414..8333574
Molecular Weight (calculated) 43370.00 Da
IEP (calculated) 9.12
GRAVY (calculated) -0.66
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTPSLRLVF VKGPREGDAL DYKPGSTIRV GRIVRGNEIA IKDAGISTKH LRIESDSGNW VIQDLGSSNG TLLNSNALDP ETSVNLGDGD VIKLGEYTSI
101: LVNFVIDDFQ EKKLTRNNRR QANARKRIRV LESINLGDIT EEEKGLDVKF ENKPSSRVRK VRKIEDSEKL GITDGLQEDL VEKNGSFRNV ESIQSSSVNL
201: IKVEMEDCAM VEENLGRGLK KRVSSKATRS KKIEESVGKA CLGVVNVEKV ETLKEKRITR ATRSKKIDIV GDSYLELDMV LNRARKNKGK NKKADQKPLK
301: SFENDEVTDS GEQGLSCHVE EDMNNELDTD LRKMTLGALF SFLEGHLSKE IIHKTENMIE PMRSKTQRVR EYISDQRKVQ AKACMC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)