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AT2G37420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding microtubule motor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45850.2); Has 44433 Blast hits to 32365 proteins in 1868 species: Archae - 445; Bacteria - 6202; Metazoa - 19487; Fungi - 4140; Plants - 3247; Viruses - 113; Other Eukaryotes - 10799 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-392-MONOMEReggNOG:COG5059eggNOG:KOG0243EMBL:AC005896
EMBL:AK228698EMBL:CP002685EnsemblPlants:AT2G37420EnsemblPlants:AT2G37420.1
entrez:818318Gene3D:3.40.850.10GeneID:818318GO:GO:0003777
GO:GO:0005524GO:GO:0005874GO:GO:0007018Gramene:AT2G37420.1
hmmpanther:PTHR24115hmmpanther:PTHR24115:SF525HOGENOM:HOG000116164InterPro:IPR001752
InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640KEGG:ath:AT2G37420
KO:K10398ncoils:CoilOMA:YIPHERFPANTHER:PTHR24115
Pfam:PF00225Pfscan:PS50067PhylomeDB:Q0WQJ7PIR:E84792
PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067Proteomes:UP000006548
Reactome:R-ATH-983189RefSeq:NP_850281.1scanprosite:PS00411SMART:SM00129
SMR:Q0WQJ7STRING:3702.AT2G37420.1SUPFAM:SSF52540TAIR:AT2G37420
UniGene:At.37425UniProt:Q0WQJ7
Coordinates (TAIR10) chr2:+:15700550..15705165
Molecular Weight (calculated) 117588.00 Da
IEP (calculated) 5.87
GRAVY (calculated) -0.68
Length 1039 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSFTPEVVSR KSGVGVIPSP APFLTPRLER RRPDSFSNRL DRDNKEVNVQ VILRCKPLSE EEQKSSVPRV ISCNEMRREV NVLHTIANKQ VDRLFNFDKV
0101: FGPKSQQRSI YDQAIAPIVH EVLEGFSCTV FAYGQTGTGK TYTMEGGMRK KGGDLPAEAG VIPRAVRHIF DTLEAQNADY SMKVTFLELY NEEVTDLLAQ
0201: DDSSRSSEDK QRKPISLMED GKGSVVLRGL EEEVVYSAND IYALLERGSS KRRTADTLLN KRSSRSHSVF TITVHIKEES MGDEELIKCG KLNLVDLAGS
0301: ENILRSGARD GRAREAGEIN KSLLTLGRVI NALVEHSSHV PYRDSKLTRL LRDSLGGKTK TCIIATISPS AHSLEETLST LDYAYRAKNI KNKPEANQKL
0401: SKAVLLKDLY LELERMKEDV RAARDKNGVY IAHERYTQEE VEKKARIERI EQLENELNLS ESEVSKFCDL YETEKEKLLD VESDLKDCKR NLHNSNKDLL
0501: DLKENYIQVV SKLKEKEVIV SRMKASETSL IDRAKGLRCD LQHASNDINS LFTRLDQKDK LESDNQSMLL KFGSQLDQNL KDLHRTVLGS VSQQQQQLRT
0601: MEEHTHSFLA HKYDATRDLE SRIGKTSDTY TSGIAALKEL SEMLQKKASS DLEKKNTSIV SQIEAVEKFL TTSATEASAV AQDIHNLLND QKKLLALAAR
0701: QQEQGLVRSM RSAQEISNST STIFSNIYNQ AHDVVEAIRA SQAEKSRQLD AFEMKFKEEA EREEKQALND ISLILSKLTS KKTAMISDAS SNIREHDIQE
0801: EKRLYEQMSG MQQVSIGAKE ELCDYLKKEK THFTENTIAS AESITVMDSY LEDCLGRAND SKTLWETTET GIKNLNTKYQ QELNVTMEDM AKENEKVQDE
0901: FTSTFSSMDA NFVSRTNELH AAVNDSLMQD RENKETTEAI VETCMNQVTL LQENHGQAVS NIRNKAEQSL IKDYQVDQHK NETPKKQSIN VPSLDSIEEM
1001: RTLFSQNTLS EEHTSLEKIS TKQGLGEANN RTPFLEVNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)