suba logo
AT1G59540.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Encodes a kinesin-like protein.
Computational
Description (TAIR10)
ZCF125; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10180.1); Has 20223 Blast hits to 16590 proteins in 689 species: Archae - 116; Bacteria - 932; Metazoa - 8945; Fungi - 2208; Plants - 2269; Viruses - 20; Other Eukaryotes - 5733 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0242EMBL:AB028468EMBL:AB028470
EMBL:CP002684EnsemblPlants:AT1G59540EnsemblPlants:AT1G59540.1entrez:842245
ExpressionAtlas:Q9S7P3Gene3D:3.40.850.10GeneID:842245GO:GO:0003777
GO:GO:0005524GO:GO:0005871GO:GO:0005874GO:GO:0007018
GO:GO:0016887Gramene:AT1G59540.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF490
HOGENOM:HOG000064717InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417
InterPro:IPR027640ncoils:CoilOMA:HIEETKGPANTHER:PTHR24115
Pfam:PF00225Pfscan:PS50067PhylomeDB:Q9S7P3PIR:T52425
PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067Proteomes:UP000006548
Reactome:R-ATH-983189RefSeq:NP_564744.1scanprosite:PS00411SMART:SM00129
SMR:Q9S7P3STRING:3702.AT1G59540.1SUPFAM:SSF52540TAIR:AT1G59540
tair10-symbols:ZCF125UniGene:At.457UniProt:Q9S7P3
Coordinates (TAIR10) chr1:+:21874083..21879382
Molecular Weight (calculated) 93153.90 Da
IEP (calculated) 6.14
GRAVY (calculated) -0.52
Length 823 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKICVAVRV RPPAPENGAS LWKVEDNRIS LHKSLDTPIT TASHAFDHVF DESSTNASVY ELLTKDIIHA AVEGFNGTAF AYGQTSSGKT FTMTGSETDP
101: GIIRRSVRDV FERIHMISDR EFLIRVSYME IYNEEINDLL AVENQRLQIH EHLERGVFVA GLKEEIVSDA EQILKLIDSG EVNRHFGETN MNVHSSRSHT
201: IFRMVIESRG KDNSSSDAIR VSVLNLVDLA GSERIAKTGA GGVRLQEGKY INKSLMILGN VINKLSDSTK LRAHIPYRDS KLTRILQPAL GGNAKTCIIC
301: TIAPEEHHIE ESKGTLQFAS RAKRITNCAQ VNEILTDAAL LKRQKLEIEE LRMKLQGSHA EVLEQEILNL SNQMLKYELE CERLKTQLEE EKRKQKEQEN
401: CIKEQQMKIE NLNNFVTNSD FKRNQSEDFI ISRKTPDGLC NVNDTSDVPG TPCFKSASRS FVVARSNNYS GLSDFSPMVH SLGDVADEDT WMKLNKGFVA
501: DLDQIQFTPA VKCQPTPLSI ATTECPRENH SEVEDLKSRI QLLTNENDSL QVKFNEQVLL SNNLMQEMSE LKQETLTVKE IPNRLSESVA NCKDVYKDVI
601: VTMKSLITDK ESPTANLLLG TTEITTSLLA TLETQFSMIM DGQKTGSSID HPLSDHWETL RVNLKNTTTL LLSDAQAKDE FLNSHNKGQE TAALEEKKLK
701: SELIIIKERY NELEKELCLD KQLLEASRES HEKLIKEVQF LKEERDSLDR KISQSTQRLR VIASDKENAL KDLNVEVKRR KDMEEEIKHI SIAFATRHKS
801: FVSFHSEIKS KMQKLTTQNS KAP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)