AT2G16270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16630.1); Has 1844 Blast hits to 1256 proteins in 271 species: Archae - 6; Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91; Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7045744..7048313 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85093.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.45 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||
| Length | 759 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASPTNKNPS FSPPIPNRPN PKPRNSEAGD PLRRSFGGNP FPANSKVNIP SDLTRRNSFG GDKENETKPV QLTPKGSKNF MSPTISAVSK INASPRKRVL 101: SDKNEMSRSF SDVKGLILED DNKRNHHRAK SCVSFSDVLH TICIDDEKKF VESHDMTVTD FDEKEVYENK GITYSDPRFR ISPRPSVPYT SPEFAACEVD 201: TLLPPYDPKK NFLSPRPQFL HYKPNPRIEK RFDECKQLEE LFISESSSDD TELSVEESEE QEKDGAEEVV VEEETEDVEQ SEAESDEEMV CESVEETTSQ 301: VPKQSGSRKF KFLGWFLALA LGYLLVSATF SPLMKSSFNE FHIPKEITEF AKANNLDQLS DKLWTLTESS LVYMDKLISR LGRGNEEYSQ LQFHNLTYTL 401: EDSTVFKPTC VEIIQEPLQE NSRSENSLED GSVNEEESGA EENSEVVCQF DELAEVKPST DIESNDGERN LKALFEDGLE LNIEELRESE MSPEEKLETE 501: KKLEETESEA IYINQPDVEF AAINVHQHIE SEILVAESGS EESFGEIGDL LHLEVGSYND LAKGDAESGS EEGFGEIAAE TSDDLHLKVR SSNKAYNDST 601: KLMIVLSSTV LVLLAVASFV FAKKTKLVAA TKPAPESNME LNLSHVPEEN LVKEKLFSLN FEEEVDDKMS NSFQKKSSCH KEPQSKGGKK NNNNSSSSKL 701: RRESMASSAS EYSIGSFSYG SFTTYEKIPI KSGREEEEMI TPVRRSSRIK NNKPSGSGL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)