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AT4G14150.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : phragmoplast-associated kinesin-related protein 1
Curator
Summary (TAIR10)
Microtubule motor kinesin PAKRP1/Kinesin-12A. Together with PAKRP1L/Kinesin-12B, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.
Computational
Description (TAIR10)
phragmoplast-associated kinesin-related protein 1 (PAKRP1); CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin-related protein (InterPro:IPR010544), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein, putative (TAIR:AT3G23670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1781-MONOMERBioGrid:12351eggNOG:COG5059eggNOG:KOG4280
EMBL:AF193767EMBL:AF193768EMBL:AL161538EMBL:CP002687
EMBL:Z97335EnsemblPlants:AT4G14150EnsemblPlants:AT4G14150.1entrez:827054
Gene3D:3.40.850.10GeneID:827054Genevisible:Q9LDN0GO:GO:0003777
GO:GO:0005524GO:GO:0005871GO:GO:0005874GO:GO:0007018
GO:GO:0009524GO:GO:0055046GO:GO:0080175Gramene:AT4G14150.1
hmmpanther:PTHR24115hmmpanther:PTHR24115:SF413HOGENOM:HOG000239080InParanoid:Q9LDN0
IntAct:Q9LDN0InterPro:IPR001752InterPro:IPR010544InterPro:IPR019821
InterPro:IPR027417InterPro:IPR027640iPTMnet:Q9LDN0KEGG:ath:AT4G14150
KO:K10400ncoils:CoilOMA:MEDACCHPANTHER:PTHR24115
PaxDb:Q9LDN0Pfam:PF00225Pfam:PF06548Pfam:Q9LDN0
Pfscan:PS50067PhylomeDB:Q9LDN0PIR:H71402PRIDE:Q9LDN0
PRINTS:PR00380PRO:PR:Q9LDN0PROSITE:PS00411PROSITE:PS50067
ProteinModelPortal:Q9LDN0Proteomes:UP000006548RefSeq:NP_567423.1scanprosite:PS00411
SMART:SM00129SMR:Q9LDN0STRING:3702.AT4G14150.1SUPFAM:SSF52540
TAIR:AT4G14150tair10-symbols:KINESIN-12Atair10-symbols:PAKRP1UniGene:At.14939
UniProt:Q9LDN0
Coordinates (TAIR10) chr4:-:8158645..8165008
Molecular Weight (calculated) 144640.00 Da
IEP (calculated) 5.66
GRAVY (calculated) -0.66
Length 1292 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKKHFTLPRN AILRDGGEPH SPNPSISKSK PPRKLRSAKE NAPPLDRNTS TPDHRSMRMK NPLPPRPPPS NPLKRKLSAE TATESGFSDS GVKVIVRMKP
0101: LNKGEEGDMI VEKMSKDSLT VSGQTFTFDS IANPESTQEQ MFQLVGAPLV ENCLSGFNSS VFAYGQTGSG KTYTMWGPAN GLLEEHLCGD QRGLTPRVFE
0201: RLFARIKEEQ VKHAERQLNY QCRCSLLEIY NEQITDLLDP SQKNLMIRED VKSGVYVENL TEEYVKNLTD VSQLLIKGLG NRRTGATSVN TESSRSHCVF
0301: TCVVESRCKN VADGLSSFKT SRINLVDLAG SERQKSTGAA GERLKEAGNI NRSLSQLGNL INILAEISQT GKPRHIPYRD SRLTFLLQES LGGNAKLAMV
0401: CAVSPSQSCR SETFSTLRFA QRAKAIQNKA VVNEVMQDDV NFLRGVIHQL RDELQRMKND GNNPTNPNVA YSTAWNARRS LNLLRSFGLG HPRSLPHEDN
0501: DGDIEMEIDE AAVERLCVQV GLQSSLASEG INHDMNRVKS IHSSDGQSIE KRLPEDSDVA MEDACCHTEN HEPETVDNMR TETETGIREN QIKTHSQTLD
0601: HESSFQPLSV KDALCSSLNK SEDVSSCPDL VPQDVTSANV LIADGVDDPE HLVNSASPSL CIDPVGATPV LKSPTLSVSP TIRNSRKSLK TSELSTASQK
0701: DSEGENLVTE AADPSPATSK KMNNCSSALS TQKSKVFPVR TERLASSLHK GIKLLESYCQ STAQRRSTYR FSFKAPDSEP STSISKADAG VQTIPGADAI
0801: SEENTKEFLC CKCKCREQFD AQQMGDMPNL QLVPVDNSEV AEKSKNQVPK AVEKVLAGSI RREMALEEFC TKQASEITQL NRLVQQYKHE RECNAIIGQT
0901: REDKIIRLES LMDGVLSKED FLDEEFASLL HEHKLLKDMY QNHPEVLKTK IELERTQEEV ENFKNFYGDM GEREVLLEEI QDLKLQLQCY IDPSLKSALK
1001: TCTLLKLSYQ APPVNAIPES QDESLEKTLE QERLCWTEAE TKWISLSEEL RTELEASKAL INKQKHELEI EKRCGEELKE AMQMAMEGHA RMLEQYADLE
1101: EKHMQLLARH RRIQDGIDDV KKAAARAGVR GAESRFINAL AAEISALKVE KEKERQYLRD ENKSLQTQLR DTAEAIQAAG ELLVRLKEAE EGLTVAQKRA
1201: MDAEYEAAEA YRQIDKLKKK HENEINTLNQ LVPQSHIHNE CSTKCDQAVE PSVNASSEQQ WRDEFEPLYK KETEFSNLAE PSWFSGYDRC NI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)