AT1G61450.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.992 What is SUBAcon? |
|||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||
| FP Images |
7-day old Arabidopsis seedling (no marker)
|
||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
|
||||||||||||||||
| Coordinates (TAIR10) | chr1:+:22673322..22673921 | ||||||||||||||||
| Molecular Weight (calculated) | 13553.10 Da | ||||||||||||||||
| IEP (calculated) | 4.25 | ||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||
| Length | 120 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDSGAILCQ ISIFKDMLDQ VNREIEANIQ VTREIESQIG ACSEIESSLS LKEPELTRSF LASQFEISGL ISVTADSRNS LKLLEDEICC LRSEHSELIT 101: KTNREAGRVC EDVFWIPKRD |
||||||||||||||||
| See Also |
|
||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)