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AT4G13630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.528
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF593
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function, DUF593; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G04890.1); Has 608 Blast hits to 585 proteins in 84 species: Archae - 0; Bacteria - 9; Metazoa - 158; Fungi - 22; Plants - 359; Viruses - 2; Other Eukaryotes - 58 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK9PeggNOG:ENOG410YJJ6EMBL:CP002687EnsemblPlants:AT4G13630
EnsemblPlants:AT4G13630.1EnsemblPlants:AT4G13630.2entrez:826997GeneID:826997
GO:GO:0016021Gramene:AT4G13630.1Gramene:AT4G13630.2hmmpanther:PTHR31422
hmmpanther:PTHR31422:SF3InterPro:IPR007656KEGG:ath:AT4G13630ncoils:Coil
OMA:LPCPCDGPfam:PF04576Proteomes:UP000006548RefSeq:NP_001190719.1
RefSeq:NP_193099.2TAIR:AT4G13630TMHMM:TMhelixUniGene:At.33354
UniProt:F4JT43
Coordinates (TAIR10) chr4:-:7934093..7936029
Molecular Weight (calculated) 64028.50 Da
IEP (calculated) 5.75
GRAVY (calculated) -0.62
Length 569 amino acids
Sequence (TAIR10)
(BLAST)
001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)