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AT4G01550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 69
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 69 (NAC069); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC with transmembrane motif1 (TAIR:AT4G01540.1); Has 2746 Blast hits to 2733 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 2744; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:13433eggNOG:ENOG410JSRPeggNOG:ENOG41108JCEMBL:AF096370
EMBL:AK229312EMBL:AL161492EMBL:CP002687EnsemblPlants:AT4G01550
EnsemblPlants:AT4G01550.1entrez:828144GeneID:828144Genevisible:Q9M126
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0005886
GO:GO:0006351GO:GO:0016021GO:GO:0045893hmmpanther:PTHR31989
hmmpanther:PTHR31989:SF5HOGENOM:HOG000097075InParanoid:Q9M126InterPro:IPR003441
KEGG:ath:AT4G01550OMA:KEYTSAKPaxDb:Q9M126Pfam:PF02365
Pfam:Q9M126Pfscan:PS51005PhylomeDB:Q9M126PIR:B85020
PIR:T01939PRO:PR:Q9M126PROSITE:PS51005ProteinModelPortal:Q9M126
Proteomes:UP000006548RefSeq:NP_001078344.1RefSeq:NP_192064.1SMR:Q9M126
STRING:3702.AT4G01550.1SUPFAM:SSF101941TAIR:AT4G01550tair10-symbols:anac069
tair10-symbols:NAC069TMHMM:TMhelixUniGene:At.34408UniProt:Q9M126
Coordinates (TAIR10) chr4:-:674025..676225
Molecular Weight (calculated) 51818.70 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.67
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKDLVGYRF YPTGEELINH YLKNKILGKT WLVDEAISEI NICSYDPIYL PSLSKIKSDD PVWYFFCPKE YTSAKKKVTK RTTSSGYWKA TGVDRKIKDK
101: RGNRGEIGIK KTLVYYEGRV PKGVWTPWVM HEYHITCLPQ DQRNYVICQV MYKGEDGDVP SGGNNSSEPS QSLVSDSNTV RATSPTALEF EKPGQENFFG
201: MSVDDLGTPK NEQEDFSLWD VLDPDMLFSD NNNPTVHPQA PHLTPNDDEF LGGLRHVNRE QVEYLFANED FISRPTLSMT ENRNDHRPKK ALSGIIVDYS
301: SDSNSDAESI SATSYQGTSS PGDDSVGSSN RQFLQTGGDE ILSSCNDLQT YGEPSISSST RQSQLTRSII RPKQEVKQDT SRAVDSDTSI DKESSMVKTE
401: KKSWFITEEA MERNRNNPRY IYLMRMIIGF ILLLALISNI ISVLQNLNPA MKFDRER
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)