AT3G62590.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:23147973..23150169 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73048.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.90 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||
| Length | 649 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGVFLKMSV VGVSPMIPVG PSSFICAIGG SVEEKSTAAS LPRWVSLRRL RPLEFLRIGG KREEKGTVRD DDAVLLERRD RNRNENDNGN WVLKILEVGS 101: IWKGKRQRSG GGGGGEEDEE EEVAEPKKKE DLCEECDFCR IDDDDEDEEK EKTVFEFSEM LSKIPVEDAQ MFAKLSFLGN LAYSIPKIKP ENLLKYQKLR 201: FVTSSIEKRM SLKVEENNNG EEDEEKKKLI NPAVAYRIAA SAASRLFSHS KSVLPFGSSK RQDNEEASLL ATADSVTAVV AAKEEVKQAV ADDLKSNRSP 301: PCEWFVCDDD KSGTRFFFIQ GSDSLASWQA NLLFEPVPFE DLDVLVHRGI YEAAKGIYEQ MLPEVHAHLN SRGKNRAFLR FSGHSLGGSL SLLVNLMLLI 401: RGQVPASSLL PVITFGSPCI MCGGDRLLQK LGLPKSHLLG ISMHRDIVPR AFSCNYPNRA AKLLKALNGN FRNHPCLNNQ NVLYSPMGKL LILQPSERFS 501: PPHPLLPPGS GLYLLASKNT DETEKSLRAA KILFFNSPHP LEILSDRRSY GSEGKIKRNH DMSSYLKALR HVIRKELKQM KAERDQWLRK FFIINILFSG 601: RDSLKLITRF VASRSSQLVI IFFLPIRLLI MSVYSVVFHH SQAHFSFFK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)