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AT1G79900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol
Computational
Description (TAIR10)
BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G79900-MONOMERBioCyc:MetaCyc:AT1G79900-MONOMEReggNOG:ENOG410Z9ZSeggNOG:KOG0762
EMBL:AC011717EMBL:AY065365EMBL:AY087444EMBL:AY096390
EMBL:CP002684EMBL:GU967412EMBL:GU967413EnsemblPlants:AT1G79900
EnsemblPlants:AT1G79900.1entrez:844329Gene3D:1.50.40.10GeneID:844329
Genevisible:Q9CA93GO:GO:0000064GO:GO:0003735GO:GO:0005290
GO:GO:0005739GO:GO:0005743GO:GO:0006412GO:GO:0006561
GO:GO:0006972GO:GO:0015181GO:GO:0015189GO:GO:0016021
GO:GO:0043091GO:GO:0089709GO:GO:1903352GO:GO:1903401
GO:GO:1903826Gramene:AT1G79900.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF270
HOGENOM:HOG000168307InParanoid:Q9CA93InterPro:IPR002067InterPro:IPR018108
InterPro:IPR023395KEGG:ath:AT1G79900KO:K15109OMA:VASWVAC
PaxDb:Q9CA93Pfam:PF00153Pfam:Q9CA93Pfscan:PS50920
PhylomeDB:Q9CA93PIR:B96830PRIDE:Q9CA93PRINTS:PR00926
PRO:PR:Q9CA93PROSITE:PS50920ProteinModelPortal:Q9CA93Proteomes:UP000006548
RefSeq:NP_178108.1SABIO-RK:Q9CA93SMR:Q9CA93STRING:3702.AT1G79900.1
SUPFAM:0048588SUPFAM:SSF103506TAIR:AT1G79900tair10-symbols:ATMBAC2
tair10-symbols:BAC2TCDB:2.A.29.8.13UniGene:At.18069UniProt:Q9CA93
Coordinates (TAIR10) chr1:-:30052524..30053599
Molecular Weight (calculated) 32254.20 Da
IEP (calculated) 9.97
GRAVY (calculated) 0.13
Length 296 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL
101: VEPPSYRGVA LGGVATGAVQ SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT YEYVRERLHP GCRKTGQENL
201: RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)