AT3G60310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 22 Blast hits to 18 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22287781..22290379 | ||||||||||||||||||||
| Molecular Weight (calculated) | 76494.20 Da | ||||||||||||||||||||
| IEP (calculated) | 6.17 | ||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||
| Length | 687 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSPSAVADL LAALAYRLQN GDELFEEEEE AEESTSSMGL AISELNRSLT LDIGCEDSGV RVVDAALSIM CFKAPQVFDS AIEFMVRTIV CALSSSSNCK 101: VIRYRNEETL QFGSSNLPGC SEELIEISKD IIEKLWGNGR LATLLFEAVV RSAASTCKIS SFNAHGKLMD GRNRAVSKLL AYLPGESSIE NHKIPLRILF 201: WYRDPLSLKV DVSRILKEVV ERPFLCVKRE LFERGEWRDI VICLAISPTM FINTRSLLHK WLLLTGLASV FEVLAGLASA IMDTISRPSL WGIPMELASM 301: LPFSDTYFPF QCQFLRILAG PLSSKSLLML AHTVSKASAV PGQQQRDTNC KPTPIKVQAL DDKTEWALAI NFPDWFYFAS AMLFSEGKSF ENIHHICASK 401: VADCRQVCDV EDLSIAAATY ISWILNPGSG TIQESVSKSL IRVSEICISK SCGSEAYRTE TITGKRKKPD RLVSGKINAS SIVEDLLREF ENNITNSVSY 501: DLDSRKTHPS FSSGLQNNLL VRRVVVGVLF GSPYSVTDEE YELVLHYAAT GKILDFKKSR STGFKQGKKF SRISALLSNE ITKEEATEGT LLVFNLTDTL 601: ESMCVSSFEA KEDAEKFINH FKLRSSKYLV KCIDRLIQLH CTQDGDPILS DINIRLLQWT VKGLEDPHFN KVLDDIAAKL ACIFSRV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)