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AT3G59310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.942
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic protein of unknown function (DUF914)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic protein of unknown function (DUF914); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262); BEST Arabidopsis thaliana protein match is: Eukaryotic protein of unknown function (DUF914) (TAIR:AT3G59340.1); Has 755 Blast hits to 748 proteins in 196 species: Archae - 2; Bacteria - 101; Metazoa - 176; Fungi - 129; Plants - 126; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).
Protein Annotations
EMBL:AB060644EMBL:AY093128EMBL:CP002686EnsemblPlants:AT3G59310
EnsemblPlants:AT3G59310.1entrez:825100ExpressionAtlas:Q948Q9GeneID:825100
GO:GO:0006810GO:GO:0016021Gramene:AT3G59310.1hmmpanther:PTHR14233
hmmpanther:PTHR14233:SF14InterPro:IPR009262KEGG:ath:AT3G59310KO:K15287
Pfam:PF06027PhylomeDB:Q948Q9Proteomes:UP000006548RefSeq:NP_191490.2
SUPFAM:0043518TAIR:AT3G59310TCDB:2.A.7.24.12TMHMM:TMhelix
UniGene:At.19766UniGene:At.66534UniProt:Q948Q9
Coordinates (TAIR10) chr3:-:21922316..21924313
Molecular Weight (calculated) 37365.90 Da
IEP (calculated) 6.14
GRAVY (calculated) 0.43
Length 332 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFDLKEIRT KKTLIGLGLG QLLSLLATSN GFTSSELARK GINVPTSQCF LNYVLLAIVY GSIMLYRRSD IKAKWYYYFL LAFVDVEANF LVVKAYQYTS
101: LTSVMLLDCW AIPCVLVLTW FYLKTKYRLM KISGVFICIV GVFMVVFSDV HAGDRAGGSN PVKGDFLVLA GATLYAVSNT SEEFLVKNAD TVELMTFLGF
201: FGAIISAIQV SILERDELKA IHWSTGAVFP FLRFTLTMFL FYPLVPVLLK TNGATMFNLS LLTSDMWAVL IRTFGYHEKV DWLYFLAFAT TATGLIIYSM
301: KEKDQEEHRF EEVGDEAAMQ RKLLGEDDEP GT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)