AT3G51650.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.703 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51640.1); Has 27645 Blast hits to 15097 proteins in 1246 species: Archae - 44; Bacteria - 3367; Metazoa - 10036; Fungi - 2690; Plants - 1205; Viruses - 196; Other Eukaryotes - 10107 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:19159449..19162267 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 94790.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.06 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||
| Length | 842 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCILCVIQKW SRQVATMLPW FVIPLIGLWA LSQLLPPAFR FEITSPRLAC VFVLLVTLFW YEVLMPQLST WRVRRNAQLR ERERLEAIEL QKLKKNATRR 101: CRNCSNPYRD QNPGGGKFMC SYCGHVSKRP VLDMALSSGL EISGSGILKD LVGRGGKMLN GKGWSENGYL HRQEWSDNST WTSGSSYWRN NSGDTFEGDE 201: NCLVEKSYSG GVVFACRLLT SFFMSILWLW RKIFRFSSSV GDSSLDPEQR RMLARQGENG TSSHESRVEK ARRKAEEKRQ ARLEKEHSEE EERKQREEVA 301: RLVEERRRLR DEILEAEKCS KFSVAAKEKD TKEAEKKRQE RRKERDRASS KSNSDGEEVD KRTRKETEQK RGLNKSDHLE HERHAPDNLR GPNMERRHGH 401: GLENNVTSNG TKSGGRYFDR MKSTTFSSSK AFTDSRIFGR GVNTSATFAR ENKPTGSADN SHTYAHSSHI NPPDFVAMKS VPNEEERNTN NPVVSEPKPS 501: REPRKSWHQL FARSTPAPVS SNVNTISRPS TNPQPNVQIS QVPSQVSSIR TFDNSISFGL PSPFTIPVYS SGSTTSSLGF SPPTEFVFPQ PGEDERFEDP 601: CYVPDPISLL GPVSESLDLR AAGYETGIGQ VKYHAMKNTP SCEANKPSPI ESPLSRSRAA DEKQANDGSW QMWKSPLGQN GLGLVGGSAN WVLPSEISRS 701: IEESDMHHAP QHRTESLFSK EDCQLHQGAY SQRKDYLEHD QRSGVFSPIT GPTTTDPWSQ KMFFPALSGI ESPFSITTQT KSVLNNAAGY RSPTGSGPDN 801: PFEHPSPNHW LKKVKSSGDG TGKQVLAAGE VENHQKDVES FW |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)