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AT3G51640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.602
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51650.1); Has 26208 Blast hits to 14155 proteins in 1229 species: Archae - 43; Bacteria - 3230; Metazoa - 9456; Fungi - 2551; Plants - 1160; Viruses - 177; Other Eukaryotes - 9591 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKTBeggNOG:ENOG410YBAKEMBL:CP002686EnsemblPlants:AT3G51640
EnsemblPlants:AT3G51640.1entrez:824327ExpressionAtlas:F4J4G9GeneID:824327
GO:GO:0016021Gramene:AT3G51640.1InParanoid:F4J4G9iPTMnet:F4J4G9
ncoils:CoilOMA:FTDSRLFPaxDb:F4J4G9PRIDE:F4J4G9
ProteinModelPortal:F4J4G9Proteomes:UP000006548RefSeq:NP_190732.2TAIR:AT3G51640
TMHMM:TMhelixUniGene:At.48759UniProt:F4J4G9
Coordinates (TAIR10) chr3:+:19154294..19157134
Molecular Weight (calculated) 94726.90 Da
IEP (calculated) 9.06
GRAVY (calculated) -0.82
Length 842 amino acids
Sequence (TAIR10)
(BLAST)
001: MCILCGIQKW SRQVATMLPW FVIPLIGLWA LSQLLPPAFR FEITSPRLAC VFVLLVTLFW YEVLMPQLST WRVRRNAQLR ERERLEAIEL QKLKKNATRR
101: CRNCSNPYRD QNPGGGKFMC SYCGHVSKRP VLDMALSSGL EISGSGILKD LVGRGGKMLN GKGWSENGYL HRQEWSDNST WTSGSSYWRN NSGDTFEGDE
201: NCLVEKSYSG GVVFACRLLT SFFMSILWLW RKIFRFSSSV GDSSLDPEQR RMLARQGENG TSCHESRVEK ARRKAEEKRQ ARLEKEHSEE EERKQREEVA
301: RLVEERRRLR DEILEAEKCS KLSVAAKEKD TKEAEKKRQE RRKERDRASS KSNSDGEEVD KRTRKETEQK RGLYKSDHLE QERHAPDNLR VPNMERRHGH
401: GLENNVTSNG TKSGGRYFDR MKGTFLSSSK AFTDSRLFGR GVNTSATIAR ENKPIGSADN SHTYAHSSHT NPPEFVAMKY VPNEEERNTN NPVVSEPKPS
501: REPKKSWHQL FARSTPAPVS SNVNTISRPS TNPQPNVQSS QVPSQVSSIR TFDNPISFGL PSPFTIPVYS SGSTTSSLGF SPPTELVFPQ PGEDERFEDP
601: CYVPDPISLL GPVSESLDLR AAGYETGIGQ VKYQAMKNTP SCEANKPSPI ESPLSRSRAA DEKQANDGSW QMWKSPLGQN GLGLVGGSAN WVIPSEISRS
701: IEESDMHHAP QHRTESLFSK EDCQLHQGAY SQRKDYLEHD QRSGVFSPIT GPTTTDPWSQ KMFFPALSGI ESPFSTTTQT KSVLNNAAGY RSPTGSGSDN
801: PFEHPSPNHW LKKVKSSGNG SGKQVLAAGE VENHQKDVES FW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)