AT3G51640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.602 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51650.1); Has 26208 Blast hits to 14155 proteins in 1229 species: Archae - 43; Bacteria - 3230; Metazoa - 9456; Fungi - 2551; Plants - 1160; Viruses - 177; Other Eukaryotes - 9591 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19154294..19157134 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 94726.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.06 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||
| Length | 842 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCILCGIQKW SRQVATMLPW FVIPLIGLWA LSQLLPPAFR FEITSPRLAC VFVLLVTLFW YEVLMPQLST WRVRRNAQLR ERERLEAIEL QKLKKNATRR 101: CRNCSNPYRD QNPGGGKFMC SYCGHVSKRP VLDMALSSGL EISGSGILKD LVGRGGKMLN GKGWSENGYL HRQEWSDNST WTSGSSYWRN NSGDTFEGDE 201: NCLVEKSYSG GVVFACRLLT SFFMSILWLW RKIFRFSSSV GDSSLDPEQR RMLARQGENG TSCHESRVEK ARRKAEEKRQ ARLEKEHSEE EERKQREEVA 301: RLVEERRRLR DEILEAEKCS KLSVAAKEKD TKEAEKKRQE RRKERDRASS KSNSDGEEVD KRTRKETEQK RGLYKSDHLE QERHAPDNLR VPNMERRHGH 401: GLENNVTSNG TKSGGRYFDR MKGTFLSSSK AFTDSRLFGR GVNTSATIAR ENKPIGSADN SHTYAHSSHT NPPEFVAMKY VPNEEERNTN NPVVSEPKPS 501: REPKKSWHQL FARSTPAPVS SNVNTISRPS TNPQPNVQSS QVPSQVSSIR TFDNPISFGL PSPFTIPVYS SGSTTSSLGF SPPTELVFPQ PGEDERFEDP 601: CYVPDPISLL GPVSESLDLR AAGYETGIGQ VKYQAMKNTP SCEANKPSPI ESPLSRSRAA DEKQANDGSW QMWKSPLGQN GLGLVGGSAN WVIPSEISRS 701: IEESDMHHAP QHRTESLFSK EDCQLHQGAY SQRKDYLEHD QRSGVFSPIT GPTTTDPWSQ KMFFPALSGI ESPFSTTTQT KSVLNNAAGY RSPTGSGSDN 801: PFEHPSPNHW LKKVKSSGNG SGKQVLAAGE VENHQKDVES FW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)