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AT3G28930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AIG2-like (avirulence induced gene) family protein
Curator
Summary (TAIR10)
avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2
Computational
Description (TAIR10)
AVRRPT2-INDUCED GENE 2 (AIG2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT3G28940.1); Has 232 Blast hits to 232 proteins in 68 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 52; Plants - 104; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
BioGrid:7858DNASU:822529EC:2.3.2.-eggNOG:ENOG410J20X
eggNOG:ENOG410XV5JEMBL:AB025615EMBL:AF372890EMBL:AY057725
EMBL:CP002686EMBL:U40857EnsemblPlants:AT3G28930EnsemblPlants:AT3G28930.1
entrez:822529Gene3D:3.10.490.10GeneID:822529Genevisible:P54121
GO:GO:0005829GO:GO:0009617GO:GO:0016746Gramene:AT3G28930.1
hmmpanther:PTHR31544HOGENOM:HOG000236377InParanoid:P54121InterPro:IPR009288
InterPro:IPR013024iPTMnet:P54121KEGG:ath:AT3G28930OMA:ETIVWAN
PaxDb:P54121Pfam:P54121Pfam:PF06094PhylomeDB:P54121
PRIDE:P54121PRO:PR:P54121ProteinModelPortal:P54121Proteomes:UP000006548
RefSeq:NP_189535.1SMR:P54121STRING:3702.AT3G28930.1SUPFAM:SSF110857
TAIR:AT3G28930tair10-symbols:AIG2UniGene:At.5960UniProt:P54121
Coordinates (TAIR10) chr3:-:10959890..10960728
Molecular Weight (calculated) 19445.90 Da
IEP (calculated) 4.69
GRAVY (calculated) -0.52
Length 170 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSSDQSPSH DVFVYGSFQE PAVVNLILEC APVMVSAQLH GYHLYRLKGR LHPCISPSDN GLINGKILTG LTDSQLESLD MIEGTEYVRK TVEVVLTDTL
101: EKKQVETIVW ANKDDPNMYG EWDFEEWKRL HMEKFIEAAT KFMEWKKNPN GRSREEFEKF VQDDSSPASA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)