AT3G21560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.657 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UGT84A2; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7875 Blast hits to 7793 proteins in 474 species: Archae - 0; Bacteria - 315; Metazoa - 2199; Fungi - 84; Plants - 5106; Viruses - 112; Other Eukaryotes - 59 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7595884..7597374 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55802.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||
| Length | 496 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELESSPPLP PHVMLVSFPG QGHVNPLLRL GKLLASKGLL ITFVTTESWG KKMRISNKIQ DRVLKPVGKG YLRYDFFDDG LPEDDEASRT NLTILRPHLE 101: LVGKREIKNL VKRYKEVTKQ PVTCLINNPF VSWVCDVAED LQIPCAVLWV QSCACLAAYY YYHHNLVDFP TKTEPEIDVQ ISGMPLLKHD EIPSFIHPSS 201: PHSALREVII DQIKRLHKTF SIFIDTFNSL EKDIIDHMST LSLPGVIRPL GPLYKMAKTV AYDVVKVNIS EPTDPCMEWL DSQPVSSVVY ISFGTVAYLK 301: QEQIDEIAYG VLNADVTFLW VIRQQELGFN KEKHVLPEEV KGKGKIVEWC SQEKVLSHPS VACFVTHCGW NSTMEAVSSG VPTVCFPQWG DQVTDAVYMI 401: DVWKTGVRLS RGEAEERLVP REEVAERLRE VTKGEKAIEL KKNALKWKEE AEAAVARGGS SDRNLEKFVE KLGAKPVGKV QNGSHNHVLA GSIKSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)