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AT5G02270.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : non-intrinsic ABC protein 9
Curator
Summary (TAIR10)
member of NAP subfamily
Computational
Description (TAIR10)
non-intrinsic ABC protein 9 (NAP9); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G03905.1); Has 211585 Blast hits to 200727 proteins in 3497 species: Archae - 4296; Bacteria - 180035; Metazoa - 2718; Fungi - 1612; Plants - 1620; Viruses - 2; Other Eukaryotes - 21302 (source: NCBI BLink).
Protein Annotations
BioGrid:16985EMBL:AF370554EMBL:AL162874EMBL:AY086132
EMBL:BT008725EMBL:CP002688EnsemblPlants:AT5G02270EnsemblPlants:AT5G02270.1
entrez:831709ExpressionAtlas:Q9LZ98Gene3D:3.40.50.300GeneID:831709
Genevisible:Q9LZ98GO:GO:0005524GO:GO:0005737GO:GO:0006810
GO:GO:0016887hmmpanther:PTHR12847hmmpanther:PTHR12847:SF5HOGENOM:HOG000200636
InParanoid:Q9LZ98IntAct:Q9LZ98InterPro:IPR003439InterPro:IPR003593
InterPro:IPR027417Pfam:PF00005Pfam:Q9LZ98Pfscan:PS50893
PhylomeDB:Q9LZ98PIR:T48248PRIDE:Q9LZ98PRO:PR:Q9LZ98
PROSITE:PS50893ProteinModelPortal:Q9LZ98Proteomes:UP000006548RefSeq:NP_195847.1
SMART:SM00382SMR:Q9LZ98SUPFAM:SSF52540TAIR:AT5G02270
tair10-symbols:ATNAP9tair10-symbols:NAP9UniGene:At.4905UniProt:Q9LZ98
Coordinates (TAIR10) chr5:-:467269..469041
Molecular Weight (calculated) 36924.70 Da
IEP (calculated) 8.62
GRAVY (calculated) -0.38
Length 328 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)