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AT5G08640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : flavonol synthase 1
Curator
Summary (TAIR10)
Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.
Computational
Description (TAIR10)
flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1); Has 8476 Blast hits to 8432 proteins in 992 species: Archae - 0; Bacteria - 1104; Metazoa - 92; Fungi - 925; Plants - 4948; Viruses - 0; Other Eukaryotes - 1407 (source: NCBI BLink).
Protein Annotations
BRENDA:1.14.11.23eggNOG:COG3491eggNOG:KOG0143EMBL:AM887639
EMBL:AM887640EMBL:AM887643EMBL:AM887644EMBL:AM887646
EMBL:AM887647EMBL:AM887648EMBL:AM887649EMBL:AM887650
EMBL:AM887651EMBL:AM887652EMBL:AM887653EMBL:AM887654
EMBL:AM887655EMBL:AM887658EMBL:EU287459EMBL:U72631
EnsemblPlants:AT5G08640EnsemblPlants:AT5G08640.1EnsemblPlants:AT5G08640.2entrez:830765
ExpressionAtlas:B1GV57Gene3D:2.60.120.330GeneID:830765GO:GO:0016491
GO:GO:0046872Gramene:AT5G08640.1Gramene:AT5G08640.2gramene_pathway:1.14.11.23
gramene_pathway:PWY-3101hmmpanther:PTHR10209hmmpanther:PTHR10209:SF165InterPro:IPR005123
InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT5G08640KO:K05278
OMA:EYMMKINPfam:PF03171Pfam:PF14226Pfam:Q96330
Pfscan:PS51471PhylomeDB:B1GV57PROSITE:PS51471RefSeq:NP_001190266.1
RefSeq:NP_196481.1SMR:B1GV57STRING:3702.AT5G08640.1SUPFAM:SSF51197
TAIR:AT5G08640tair10-symbols:ATFLS1tair10-symbols:FLStair10-symbols:FLS1
UniGene:At.8771UniPathway:UPA00154UniProt:B1GV57UniProt:Q96330
Coordinates (TAIR10) chr5:+:2804009..2805175
Molecular Weight (calculated) 38283.80 Da
IEP (calculated) 5.70
GRAVY (calculated) -0.51
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)