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AT3G17090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: endomembrane system, protein serine/threonine phosphatase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G38520.2); Has 5376 Blast hits to 5373 proteins in 286 species: Archae - 0; Bacteria - 18; Metazoa - 1356; Fungi - 523; Plants - 2541; Viruses - 5; Other Eukaryotes - 933 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G17090-MONOMERBioCyc:ARA:GQT-2235-MONOMEREC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0700EMBL:AB026636EMBL:AY085196EMBL:BT026468
EMBL:CP002686EnsemblPlants:AT3G17090EnsemblPlants:AT3G17090.1entrez:820966
Gene3D:3.60.40.10GeneID:820966Genevisible:Q0V7V2GO:GO:0004722
GO:GO:0046872hmmpanther:PTHR13832hmmpanther:PTHR13832:SF325HOGENOM:HOG000238703
InParanoid:Q0V7V2InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655
KEGG:ath:AT3G17090KO:K01102OMA:SEHNANQPANTHER:PTHR13832
PaxDb:Q0V7V2Pfam:PF00481Pfam:Q0V7V2Pfscan:PS51746
PhylomeDB:Q0V7V2PRIDE:Q0V7V2PRO:PR:Q0V7V2PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:Q0V7V2Proteomes:UP000006548RefSeq:NP_001030714.1
RefSeq:NP_566566.1scanprosite:PS01032SMART:SM00332SMR:Q0V7V2
STRING:3702.AT3G17090.1SUPFAM:SSF81606TAIR:AT3G17090UniGene:At.6353
UniGene:At.67073UniProt:Q0V7V2
Coordinates (TAIR10) chr3:+:5826984..5829327
Molecular Weight (calculated) 42491.50 Da
IEP (calculated) 6.93
GRAVY (calculated) -0.28
Length 384 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGSLMNLFS LCFKPFGHVC DNSEAGSGGG GGVSGGTGGE GKDGLLWFRD LGKYCGGDFS MAVIQANQVL EDQSQVESGN FGTFVGVYDG HGGPEAARYV
101: CDHLFNHFRE ISAETQGVVT RETIERAFHA TEEGFASIVS ELWQEIPNLA TVGTCCLVGV IYQNTLFVAS LGDSRVVLGK KGNCGGLSAI QLSTEHNANN
201: EDIRWELKDL HPDDPQIVVF RHGVWRVKGI IQVSRSIGDM YMKRPEFNKE PISQKFRIAE PMKRPLMSAT PTILSHPLHP NDSFLIFASD GLWEHLTNEK
301: AVEIVHNHPR AGSAKRLIKA ALHEAARKRE MRYSDLRKID KKVRRHFHDD ITVIVVFLNH DLISRGHINS TQDTTVSIRS ALEH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)