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AT3G08630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF3411)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08640.1); Has 4366 Blast hits to 2077 proteins in 248 species: Archae - 0; Bacteria - 513; Metazoa - 2417; Fungi - 136; Plants - 874; Viruses - 19; Other Eukaryotes - 407 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKWBeggNOG:ENOG4111GA1EMBL:AC012562EMBL:AK228104
EMBL:BT012218EMBL:BT012416EMBL:CP002686EnsemblPlants:AT3G08630
EnsemblPlants:AT3G08630.1entrez:820010GeneID:820010Genevisible:Q9C9Z3
GO:GO:0007275GO:GO:0009536GO:GO:0016021GO:GO:0031969
Gramene:AT3G08630.1hmmpanther:PTHR31620hmmpanther:PTHR31620:SF5InParanoid:Q9C9Z3
InterPro:IPR021825KEGG:ath:AT3G08630ncoils:CoilOMA:RSCPSSH
PaxDb:Q9C9Z3Pfam:PF11891PhylomeDB:Q9C9Z3PRIDE:Q9C9Z3
PRO:PR:Q9C9Z3ProteinModelPortal:Q9C9Z3Proteomes:UP000006548RefSeq:NP_187475.1
STRING:3702.AT3G08630.1TAIR:AT3G08630TMHMM:TMhelixUniGene:At.17599
UniProt:Q9C9Z3
Coordinates (TAIR10) chr3:+:2620943..2621962
Molecular Weight (calculated) 35952.50 Da
IEP (calculated) 8.70
GRAVY (calculated) 0.06
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMAAKLHI STKSDQSNVR LPRLINLSRD PTARVLFPRN GSVSSLHTNF SSPNIMVPCA GGGGGGSIGN HGGGSGSGGG GGGYGGSEEE ESSPWGPLGL
101: FIQGWRSRVA ADSQFPFKVL MEMLVGVSAN VLGDMASRPN FGLNELDFVF STLVVGSILN FTLMYLLAPS AISHGSSNLL PGIFRSCPSS HMFEQGNFTL
201: MNRFGTLVYK GMVFATVGLA AGLVGTAISN GLIMLRKKID PSFETPNKPP PTLLNSLTWA THMGVSANVR YQTLNGAEFL LEKSLPPLVF KTSVIALRVV
301: NNVLGGMSFV TLARMTGSQS VEEEKKIEMS EISEKEKED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)