AT3G05140.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.922 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : ROP binding protein kinases 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ROP binding protein kinases 2 (RBK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G18910.1); Has 106611 Blast hits to 105596 proteins in 3392 species: Archae - 84; Bacteria - 12146; Metazoa - 38869; Fungi - 8564; Plants - 31291; Viruses - 415; Other Eukaryotes - 15242 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:1435817..1437800 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 51421.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 460 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MNSASAHDLR LLEVDKEKQD PKSPRGALEA CLTRCSISSA SSSSDDPPPN REAIDNADAD TDVQCKNHRA SSNWGKFFKL WKRRSMKRLS SFPPLSGAAP 101: PIIKQNKSAD PNMNGMVLHD IYDFQSSLQN FSISDIEIAT DNFSPENIIG RGGYADVYQG ILPEGKLIAV KRLTKGTPDE QTAEFLSELG IIAHVDHPNT 201: AKFIGCCIEG GMHLVFRLSP LGSLGSLLHG PSKYKLTWSR RYNVALGTAD GLVYLHEGCQ RRIIHRDIKA DNILLTEDFQ PQICDFGLAK WLPKQLTHHN 301: VSKFEGTFGY FAPEYFMHGI VDEKTDVFAF GVLLLELITG HPALDESQQS LVLWAKPLLE RKAIKELVDP SLGDEYNREE LIRLTSTASL CIDQSSLLRP 401: RMSQVVELLL GHEDVVMTPR EAKIKMMQRT YSEELLDSVE YNSTKYLGDL DRIREVALAS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)