AT3G61160.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.994 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like protein kinase 32 (TAIR:AT4G00720.1); Has 105887 Blast hits to 104676 proteins in 3456 species: Archae - 87; Bacteria - 10670; Metazoa - 39368; Fungi - 11783; Plants - 25310; Viruses - 436; Other Eukaryotes - 18233 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:22636209..22638593 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 49316.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.78 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 431 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MNVVRRLTSI ASGRNFVSSD NVGETETPRS KPNQNREETE STETTSYEKD SVSSSENSDH LPKEIREDMD CGIIKGNGTE SGRIITTKKK GLNDQKDKTI 101: SYRAEHVIGT GSFGVVFQAK CLETEEKVAI KKVLQDKRYK NRELQIMRML DHPNVVELKH SFFSTTEKDE LYLNLVLEYV PETIYRASRS YTKMNQHMPL 201: IYIQLYTYQI CRAMNYLHQV VGVCHRDIKP QNLLVNNVTH EVKICDFGSA KMLIPGEPNI SYICSRYYRA PELIFGATEY TSAIDMWSVG CVMAELFLGH 301: PLFPGETSVD QLVEIIKILG TPAREEIKNM NPRYNDFKFP QIKAQPWHKI FRRQVSPEAM DLASRLLQYS PNLRCTALEA CAHPFFDDLR DPRASLPNGR 401: ALPPLFDFTA QELAGASVEL RHRLIPEHAR K |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)