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AT1G68110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ENTH/ANTH/VHS superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT1G25240.1); Has 367 Blast hits to 350 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 7; Plants - 350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ90eggNOG:KOG0251EMBL:AC012563EMBL:AF410278
EMBL:AY149923EMBL:CP002684EnsemblPlants:AT1G68110EnsemblPlants:AT1G68110.1
entrez:843139Gene3D:1.20.58.150Gene3D:1.25.40.90GeneID:843139
Genevisible:Q9C9X5GO:GO:0005545GO:GO:0005794GO:GO:0005905
GO:GO:0006897GO:GO:0030136GO:GO:0048268Gramene:AT1G68110.1
hmmpanther:PTHR22951hmmpanther:PTHR22951:SF19HOGENOM:HOG000242855InParanoid:Q9C9X5
InterPro:IPR008942InterPro:IPR011417InterPro:IPR013809InterPro:IPR014712
KEGG:ath:AT1G68110OMA:FAYLDQRPaxDb:Q9C9X5Pfam:PF07651
Pfam:Q9C9X5Pfscan:PS50942PhylomeDB:Q9C9X5PIR:D96704
PRIDE:Q9C9X5PRO:PR:Q9C9X5PROSITE:PS50942ProteinModelPortal:Q9C9X5
Proteomes:UP000006548RefSeq:NP_564922.1SMART:SM00273STRING:3702.AT1G68110.1
SUPFAM:SSF48464SUPFAM:SSF89009TAIR:AT1G68110UniGene:At.19366
UniProt:Q9C9X5
Coordinates (TAIR10) chr1:+:25524901..25526040
Molecular Weight (calculated) 43843.00 Da
IEP (calculated) 7.82
GRAVY (calculated) -0.26
Length 379 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)