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AT2G46320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.572
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: manganese tracking factor for mitochondrial SOD2 (TAIR:AT4G27940.1); Has 17946 Blast hits to 11927 proteins in 409 species: Archae - 0; Bacteria - 2; Metazoa - 7501; Fungi - 5171; Plants - 3608; Viruses - 0; Other Eukaryotes - 1664 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQVPeggNOG:KOG0761EMBL:CP002685EnsemblPlants:AT2G46320
EnsemblPlants:AT2G46320.1entrez:819240ExpressionAtlas:F4II70Gene3D:1.50.40.10
GeneID:819240GO:GO:0016021GO:GO:0055085Gramene:AT2G46320.1
hmmpanther:PTHR24089hmmpanther:PTHR24089:SF397InParanoid:F4II70InterPro:IPR002067
InterPro:IPR018108InterPro:IPR023395KEGG:ath:AT2G46320KO:K15119
OMA:FRNIMEEPaxDb:F4II70Pfam:PF00153Pfscan:PS50920
PRIDE:F4II70PRINTS:PR00926PROSITE:PS50920ProteinModelPortal:F4II70
Proteomes:UP000006548RefSeq:NP_850451.1SMR:F4II70STRING:3702.AT2G46320.1
SUPFAM:0048588SUPFAM:SSF103506TAIR:AT2G46320UniGene:At.36524
UniGene:At.48601UniProt:F4II70
Coordinates (TAIR10) chr2:+:19015998..19018020
Molecular Weight (calculated) 39160.30 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.04
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEEAQLDPK SKSIPNENLK FGERALSAGG AAFISAVIVN PLDVVKTRLQ AQAAGVPYQG SCRLGCFDTN STLVHDLRSN SAPGMCRITG SASVCSDNQY
101: KGTLDVFYKI IRQEGFSRLW RGTNASLTLA IPTVGIYMPC YDYFRNIMEE FTTEKSPSLT VYVPLVAGTI ARSLACISCY PVELARTRMQ AFKGTQRNVK
201: LPGVWKTLVD VVNPVKGSNN GYRMLWTGLG AQLARDVPFS AICWSILEPT RRSIQSAMGE EPRAGSIIGA NFAAGFVAGA VAAAATCPLD VAKTRRQIEK
301: NTDRAMTMTT RQTLAEIWRD GGMRGMFSGA GARVGRAGPS VAIVVSFYEV VKYGLHNFHQ Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)