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AT2G45900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT3G61380.1); Has 396 Blast hits to 374 proteins in 94 species: Archae - 0; Bacteria - 31; Metazoa - 55; Fungi - 42; Plants - 167; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK23eggNOG:ENOG410YE0MEMBL:AC004665EMBL:CP002685
EnsemblPlants:AT2G45900EnsemblPlants:AT2G45900.1entrez:819198GeneID:819198
GO:GO:0009506GO:GO:0009739GO:GO:0016740Gramene:AT2G45900.1
hmmpanther:PTHR21726hmmpanther:PTHR21726:SF30HOGENOM:HOG000015118InterPro:IPR025486
KEGG:ath:AT2G45900OMA:EETEFMPPfam:PF14309PhylomeDB:O80829
PIR:T02457Proteomes:UP000006548RefSeq:NP_182114.1STRING:3702.AT2G45900.1
TAIR:AT2G45900UniGene:At.36573UniProt:O80829
Coordinates (TAIR10) chr2:-:18886069..18888674
Molecular Weight (calculated) 81668.80 Da
IEP (calculated) 4.35
GRAVY (calculated) -0.65
Length 720 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKEICRRHL SREGLGCVWV FMSMFDFRHG GSNQKLLMDK KRRSKRIIIG NNGVFETKVE KQLTCDCDCD EESEAEMQSV KKLIEAEIDE KTTQKCEARN
101: RKRRSRTCSK ISEDINVLIA GDDDDDHAEK SDNECPIVSH NEVDMVNDDS EEKFSELIKR LIAQKESEVE SCKKNLVDAF QVLDSKEESL NIGTPTSGDS
201: QRIKETQTIV ILKPEPNTLD VGSSPGTPST DNKAKNEKFS SRFSLSRIRR RLKFAVGKNP CNAQHDSDPD PDADALSSSM SQNCCLGEEI ETNPGSDGEI
301: LPDIASKGEA NKEDTFHESE KDSKKSMCGI YIAAKKHLSE MLAEGDIDAD LPDKEVPRIL GKILALPEFF TPENSPRVTL ALDHQIIEKP NIQQCSSKDY
401: YYEPLRLDSN NHEETEFMPV PEDTRMEEEE QTVMDSLSEA ISSSIIQQDA YIDEDEHKQL LEKEVLKEGQ SPCSPPNSSV RMSECQENTT DVLGKSSPVS
501: VLEPFFTDDD TSPNSSRFSS AEMRMQPLCI RFDEPDFPGP EKDNDVKTRM DDKELALEYI QAVVKSSELN WEELLARSFY SEKILEQALM DDIDFCSTNL
601: CSDKKLLFDC INEVLMEFCG HGPWISFVKP AMHFFPDMEN AVEVVQEEVY WHLLPLPSPH TLDQIVRKDL ARTGNWMDLR FDIGCIVSET GEIILDELLE
701: EIISNCRDLV QPERINKLVP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)